Population genetic analysis reveals a low level of genetic diversity of ‘Candidatus Phytoplasma aurantifolia’ causing witches’ broom disease in lime

Al-Abadi, Shaikha Y.; Al-Sadi, Abdullah M.; Dickinson, Matthew; Al-Hammadi, Mohammed S.; Al-Shariqi, Rashid; Al-Yahyai, Rashid A.; Kazerooni, Elham A.; Bertaccini, Assunta

doi:10.1186/s40064-016-3401-0

SpringerPlus

Table 2 Characteristics of samples collected from Oman, UAE and Iran

From: Population genetic analysis reveals a low level of genetic diversity of ‘Candidatus Phytoplasma aurantifolia’ causing witches’ broom disease in lime

No.	Sample code	Country	Governorate/province	Year of collection	GenBank accession numbers
No.	Sample code	Country	Governorate/province	Year of collection	16S rRNA	secA	imp
1	Iran 1	Iran	Hormozgan	2013	LN872963	LN873084	LN873020
2	Iran 2	Iran	Hormozgan	2013	LN872966	LN873087	LN873023
3	Iran 3	Iran	Hormozgan	2013	LN872969	LN873090	LN873026
4	Iran 4	Iran	Hormozgan	2013	LN872972	LN873093	LN873029
5	Iran 5	Iran	Hormozgan	2013	LN872975	LN873096	LN873032
6	Iran 6	Iran	Kerman	2013	LN872978	LN873099	LN873035
7	Iran 7	Iran	Kerman	2013	LN872981	LN873102	LN873038
8	Iran 8	Iran	Kerman	2013	LN872984	LN873105	LN873041
9	Iran 9	Iran	Kerman	2013	LN872986	LN873107	LN873043
10	Iran 10	Iran	Hormozgan	2013	LN872989	LN873110	LN873046
11	UAE 1	UAE	Al-Ain	2013	LN872965	LN873086	LN873022
12	UAE 2	UAE	Al-Ain	2013	LN872968	LN873089	LN873025
13	UAE 3	UAE	Al-Ain	2013	LN872971	LN873092	LN873028
14	UAE 4	UAE	Al-Ain	2013	LN872974	LN873095	LN873031
15	UAE 5	UAE	Al-Ain	2013	LN872977	LN873098	LN873034
16	UAE 6	UAE	Al-Ain	2013	LN872980	LN873101	LN873037
17	UAE 7	UAE	Al-Ain	2013	LN872983	LN873104	LN873040
18	UAE 9	UAE	Al-Ain	2013	LN872988	LN873109	LN873045
19	UAE 10	UAE	Al-Ain	2013	LN872991	LN873112	LN873048
20	Oman 1	Oman	Musandam	2013	LN872964	LN873085	LN873021
21	Oman 2	Oman	Musandam	2013	LN872967	LN873088	LN873024
22	Oman 3	Oman	Musandam	2013	LN872970	LN873091	LN873027
23	Oman 4	Oman	Musandam	2013	LN872973	LN873094	LN873030
24	Oman 5	Oman	Musandam	2013	LN872976	LN873097	LN873033
25	Oman 6	Oman	Musandam	2013	LN872979	LN873100	LN873036
26	Oman 7	Oman	Musandam	2013	LN872982	LN873103	LN873039
27	Oman 8	Oman	Musandam	2013	LN872985	LN873106	LN873042
28	Oman 9	Oman	Musandam	2013	LN872987	LN873108	LN873044
29	Oman 10	Oman	Batinah	2014	LN872990	LN873111	LN873047
30	Oman 11	Oman	Batinah	2014	LN872992	LN873113	LN873049
31	Oman 12	Oman	Batinah	2014	LN872993	LN873114	LN873050
32	Oman 13	Oman	Batinah	2014	LN872994	LN873115	LN873051
33	Oman 14	Oman	Batinah	2014	LN872995	LN873116	LN873052
34	Oman 15	Oman	Batinah	2014	LN872996	LN873117	LN873053
35	Oman 16	Oman	Batinah	2014	LN872997	LN873118	LN873054
36	Oman 17	Oman	Batinah	2014	LN872998	LN873119	LN873055
37	Oman 18	Oman	Batinah	2014	LN872999	LN873120	LN873056
38	Oman 19	Oman	Batinah	2014	LN873000	LN873121	LN873057
39	Oman 20	Oman	Batinah	2014	LN873001	LN873122	LN873058
40	Oman 21	Oman	Batinah	2014	LN873002	LN873123	LN873059
41	Oman 22	Oman	Batinah	2014	LN873003	LN873124	LN873060
42	Oman 23	Oman	Batinah	2014	LN873004	LN873125	LN873061
43	Oman 24	Oman	Batinah	2014	LN873005	LN873126	LN873062
44	Oman 25	Oman	Batinah	2014	LN873006	LN873127	LN873063
45	Oman 26	Oman	Batinah	2014	LN873007	LN873128	LN873064
46	Oman 27	Oman	Dakhlia	2014	LN873008	LN873129	LN873065
47	Oman 28	Oman	Dakhlia	2014	LN873009	LN873130	LN873066
48	Oman 29	Oman	Dakhlia	2014	LN873010	LN873131	LN873067
49	Oman 30	Oman	Dakhlia	2014	LN873011	LN873132	LN873068
50	Oman 31	Oman	Dakhlia	2014	LN873012	LN873133	LN873069
51	Oman 32	Oman	Dakhlia	2014	LN873013	LN873077	LN873070
52	Oman 34	Oman	Dhahira	2014	LN873014	LN873078	LN873071
53	Oman 35	Oman	Dhahira	2014	LN873015	LN873079	LN873072
54	Oman 36	Oman	Dhahira	2014	LN873016	LN873080	LN873073
55	Oman 37	Oman	Dhahira	2014	LN873017	LN873081	LN873074
56	Oman 38	Oman	Dhahira	2014	LN873018	LN873082	LN873075
57	Oman 39	Oman	Dhahira	2014	LN873019	LN873083	LN873076

Back to article page