Genetic diversity and relationship of cattle populations of East India: distinguishing lesser known cattle populations and established breeds based on STR markers

Sharma, Rekha; Maitra, Avishek; Singh, Pramod Kumar; Tantia, Madhu Sudan

doi:10.1186/2193-1801-2-359

SpringerPlus

Table 2 Genetic variability parameters of five cattle populations

From: Genetic diversity and relationship of cattle populations of East India: distinguishing lesser known cattle populations and established breeds based on STR markers

	Bachaur				Gangatiri				Shahabadi				Purnea				Siri
Locus	No	Ne	Ho	He	No	Ne	Ho	He	No	Ne	Ho	He	No	Ne	Ho	He	No	Ne	Ho	He
BM1824	6	2.678	0.580	0.627	5	2.400	0.660	0.583	6	2.471	0.532	0.595	4	2.297	0.404	0.565	6	3.683	0.667	0.729
CSSM08	7	2.119	0.510	0.528	6	2.533	0.667	0.605	6	2.496	0.545	0.599	7	2.409	0.581	0.585	6	2.950	0.600	0.661
CSSM33	14	6.767	0.875	0.852	15	6.840	0.860	0.854	16	7.810	0.896	0.872	13	7.007	0.826	0.857	12	5.914	0.830	0.831
CSSM66	9	3.740	0.680	0.733	11	4.803	0.860	0.792	13	5.086	0.854	0.803	14	5.084	0.745	0.803	8	3.411	0.688	0.707
ETH10	9	4.655	0.880	0.785	11	5.025	0.900	0.801	6	4.064	0.814	0.754	4	2.673	0.891	0.626	14	7.266	0.894	0.862
ETH225	9	2.231	0.560	0.552	8	2.019	0.500	0.505	10	2.051	0.583	0.512	10	6.258	0.851	0.840	9	4.148	0.708	0.759
ETH3	8	3.541	0.980	0.718	9	3.671	0.860	0.728	14	6.508	0.958	0.846	7	3.899	0.979	0.744	8	3.796	0.979	0.737
HEL09	10	7.529	0.979	0.867	10	6.527	0.900	0.847	10	7.396	0.896	0.865	10	8.000	0.833	0.875	12	8.243	0.766	0.879
HEL5	11	4.361	0.714	0.771	10	5.219	0.857	0.808	13	6.585	1.000	0.848	10	3.901	0.844	0.744	10	6.853	0.756	0.854
ILSTS06	7	3.058	0.500	0.673	8	4.062	0.640	0.754	9	3.298	0.545	0.697	8	4.691	0.619	0.787	9	4.485	0.489	0.777
ILSTS11	5	2.288	0.469	0.563	5	2.600	0.500	0.615	5	3.150	0.558	0.683	4	1.928	0.422	0.481	5	4.212	0.638	0.763
ILSTS34	19	7.444	0.875	0.866	16	6.046	0.760	0.835	15	4.571	0.750	0.781	10	4.054	0.652	0.753	14	6.914	0.851	0.855
ILSTS33	8	3.460	0.714	0.711	7	2.350	0.548	0.575	9	4.150	0.727	0.759	6	2.864	0.531	0.651	8	4.295	0.733	0.767
INRA05	7	4.367	0.640	0.771	8	4.394	0.820	0.772	7	4.509	0.708	0.778	6	4.251	0.581	0.765	7	3.938	0.729	0.746
INRA35	12	5.723	0.755	0.825	8	4.570	0.667	0.781	17	10.301	0.860	0.903	6	3.081	0.621	0.675	8	4.054	0.844	0.753
INRA63	6	2.501	0.520	0.600	5	2.627	0.580	0.619	6	2.781	0.563	0.640	7	3.446	0.837	0.710	7	2.366	0.521	0.577
MM12	11	5.149	0.760	0.806	10	4.146	0.720	0.759	13	4.295	0.729	0.767	15	4.909	0.787	0.796	10	2.841	0.604	0.648
MM8	8	2.737	0.560	0.635	6	2.667	0.680	0.625	8	3.072	0.625	0.674	8	2.703	0.605	0.630	6	2.525	0.583	0.604
TGLA122	14	8.666	0.900	0.885	12	9.728	0.920	0.897	14	9.732	0.791	0.897	13	7.627	0.844	0.869	12	8.925	0.915	0.888
TGLA227	6	1.492	0.380	0.330	8	1.571	0.360	0.363	12	1.831	0.417	0.454	10	1.871	0.302	0.466	11	2.869	0.667	0.651
TGLA53	13	3.408	0.740	0.707	15	2.648	0.640	0.622	14	3.485	0.628	0.713	15	2.557	0.545	0.609	12	3.532	0.681	0.717
Mean	9.476	4.186	0.694	0.705	9.190	4.117	0.709	0.702	10.619	4.745	0.713	0.735	8.905	4.072	0.681	0.706	9.238	4.629	0.721	0.751
S. D.	0.752	0.440	0.038	0.030	0.716	0.436	0.034	0.030	0.824	0.532	0.035	0.027	0.771	0.402	0.040	0.027	0.589	0.421	0.028	0.020

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