Table 2 List of rice nutrient traits associated with different QTLs (>3.0 LOD) mapped in different rice population
S. no | Grain traits | Chr | QTLs | Markers | Type | Peak marker | Populations | References |
|---|---|---|---|---|---|---|---|---|
1 | PC | 1 | qPr1 | RM493-RM562 | RILs | RM493-RM562 | Zhenshan97B/Delong 208 | Zhong et al. (2011) |
2 | PC | 1 | qPC1.1 | 1008-RM575 | DHs | Samgang/Nagdong | Qin et al. (2009) | |
3 | MAC-P | 1 | qP.1 | RM3411 | LT/TL-RILs | TeQing/Lemont | Zhang et al. (2014) | |
4 | MAC-K | 1 | qK.1 | RM5501 | LT/TL-RILs | Lemont/TeQing | Zhang et al. 2014 | |
5 | PC | 1 | qPC1 | RM472-RM104 | RILs | Zhenshan97/Nanyangzhan | Peng et al. (2014) | |
6 | AAC | 1 | qAa1 | RM493-RM562 | RILs | Zhenshan97B/Delong 208 | Zhong et al. (2011) | |
7 | MAC-P | 1 | qP.1 | RM495 | LT/TL-RILs | Lemont/TeQing | Zhang et al. (2014) | |
8 | MAC-Cd | 1 | qCd.1 | RM6840 | LT-RILs | |||
9 | Zn | 1 | qZn.1 | RM34-RM237 | DHs | IR64/Azucena | James et al. (2007) | |
10 | Mn | 1 | qMn.1 | RM243-RM312 | DHs | |||
11 | MAC-Co | 1 | qCo.1 | RM490 | LT/TL-RILs | Lemont/TeQing | Zhang et al. (2014) | |
12 | MAC-Ca | 1 | qCa1-1 | RM6480 | ILs | O. rufipogon/Teqing | Garcia-Oliveira et al. (2008) | |
13 | MAC-P | 1 | qP1-1 | RM212 | ILs | |||
14 | Fe | 1 | qFe1.1 | RM243-RM488 | RILs | Madhukar/Swarna | Anuradha et al. (2012) | |
15 | Fe | 1 | qFe1.2 | RM488-RM490 | RILs | |||
16 | AAC-Asp/Thr/Glu/Gly/Ala/Cys/Tyr/Pro/Eaa/total | 1 | qAA.1 | RM472-RM104 | RILs | RM472 | Zhenshan97/Nanyangzhan | Wang et al. (2008) |
17 | Fe | 1 | qFe.1 | RM259-RM243 | RILs | RM259-RM243 | Zhenshan 97/Minghui 63 | Kaiyang et al. (2008) |
18 | MIC-Fe | 2 | qFe2-1 | RM6641 | ILs | O. rufipogon/Teqing | Garcia-Oliveira et al. (2008) | |
19 | PC | 2 | qPC-2 | RM5897-RM6247 | RILs | Chuan7/Nanyanghan | Lou et al. (2009) | |
20 | MIC-Cu | 2 | qCu.2 | RM6378 | LT/TL-RILs | Lemont/TeQing | Zhang et al. (2014) | |
21 | MAC-Sr | 2 | qSr.2 | RM3688 | LT-RILs | |||
22 | Fe | 2 | qFe.2 | RM53-RM300 | DHs | RM53-RM300 | IR64/Azucena | James et al. (2007) |
23 | AAC-His | 2 | qAA.2 | RM324-RM301 | RILs | RM301 | Zhenshan97/Nanyangzhan | Wang et al. (2008) |
24 | AAC-Val/Ile/Leu/His/Phe | 2 | qAA.2 | RM322-RM521 | RILs | RM521 | ||
25 | PC | 2 | qLip-2 | RM5619-RM1211 | DHs | Cheongcheong/Nagdong | Yun et al. (2014) | |
26 | PC | 2 | qPro-2 | RM12532-RM555 | DHs | Cheongcheong/Nagdong | Lee et al. (2014) | |
27 | MIC-Fe | 2 | qFe.2 | RM452 | LT/TL-RILs | Lemont/TeQing | Zhang et al. (2014) | |
28 | MIC-Mn | 2 | qMn2-1 | RM6367 | ILs | O. rufipogon/Teqing | Garcia-Oliveira et al. (2008) | |
29 | MAC-S | 2 | qS.2 | RM266 | LT-RILs | Lemont/TeQing | Zhang et al. (2014) | |
30 | MAC-Ca | 3 | qCa.3 | RM5626-RM16 | LT/TL-RILs | |||
31 | MAC-Rb | 3 | qRb.3 | RM489 | LT-RILs | |||
32 | AAC-Tyr | 3 | qAA.3 | RM520-RM468 | RILs | RM520 | Zhenshan97/Nanyangzhan | Wang et al. (2008) |
33 | MAC-Mg | 3 | qMg3-1 | RM5488 | ILs | O. rufipogon/Teqing | Garcia-Oliveira et al. (2008) | |
34 | Ca | 3 | qCa.3. | RM200-RM227 | RILs | Zhenshan 97/Minghui 63 | Kaiyang et al. (2008) | |
35 | PC | 3 | qPC-3 | RM251-RM282 | RILs | Xieqingzao B/Milyang | Yu et al. (2009) | |
36 | Zn | 3 | qZn3.1 | RM7-RM517 | RILs | Madhukar × Swarna | Anuradha et al. (2012) | |
37 | PC | 3 | qPC-3 | RM251-RM282 | RILs | Xieqingzao B/Milyang | Yu et al. (2009) | |
38 | Mn | 3 | qMn.3 | RM227-R1925 | RILs | Zhenshan 97/Minghui 63 | Kaiyang et al. (2008) | |
39 | Cu | 3 | qCu.1 | R1925-RM148 | RILs | R1925-RM148 | ||
40 | AAC-Thr/Gly/His/Arg | 4 | qAA.4 | RM348-RM131 | RILs | RM131 | Zhenshan97/Nanyangzhan | Wang et al. (2008) |
41 | CPB | 4 | qcpb4 | E12M61.256 | RILs | Cypress/Panda | Kepiro et al. (2008) | |
42 | CPH | 4 | qcph4 | E12M61.256 | RILs | |||
43 | Cu | 5 | qCu.5 | C1447-RM31 | RILs | Zhenshan 97/Minghui 63 | Kaiyang et al. (2008) | |
44 | PA | 5 | qPA.5 | RM305-RM178 | DHs | IR64/Azucena | James et al. (2007) | |
45 | FC | 5 | qFC-5 | RG480-RM274 | RILs | Xieqingzao B/Milyang | Yu et al. (2009) | |
46 | Fe | 5 | qFe5.1 | RM574-RM122 | RILs | Madhukar/Swarna | Anuradha et al. (2012) | |
47 | MAC-Ca | 5 | qCa5-1 | RM598 | ILs | O. rufipogon/Teqing | Garcia-Oliveira et al. (2008) | |
48 | MIC-Zn | 5 | RM421 | LT/TL-RILs | Lemont/TeQing | Zhang et al. (2014) | ||
49 | LC | 6 | qLIp-6 | RM586-RM1163 | DHs | Cheongcheong/Nagdong | Yun et al. (2014) | |
50 | PC | 6 | qPC-6 | RM190-RZ516 | RILs | RM190-RZ516 | Xieqingzao B/Milyang | Yu et al. (2009) |
51 | FC | 6 | qFC-6 | RM190-RZ516 | RILs | RM190-RZ516 | Xieqingzao B/Milyang | Yu et al. (2009) |
52 | MIC-Cu | 6 | qCu6-1 | RM204 | ILs | O. rufipogon/Teqing | Garcia-Oliveira et al. (2008) | |
53 | Zn | 6 | qZn.6 | RZ398-RM204 | RILs | Zhenshan 97/Minghui 63 | Kaiyang et al. (2008) | |
54 | PC | 6 | qPC-6 | RM190-RZ516 | RILs | Xieqingzao B/Milyang | Yu et al. (2009) | |
55 | MAC-Mg | 6 | qMg.6 | OSR 21 | LT/TL-RILs | Lemont/TeQing | Zhang et al. (2014) | |
56 | PC | 7 | qPc7 | RM270-C751 | DHs | Yuefu/IRAT109 | Yongmei et al. (2007) | |
57 | MIC-Mn | 7 | qMn.7 | RM214 | LT/TL-RILs | Lemont/TeQing | Zhang et al. (2014) | |
58 | AAC-Pro/Gly/Met/Arg | 7 | qAA.7 | RM125-RM214 | RILs | RM214 | Zhenshan97/Nanyangzhan | Wang et al. (2008) |
59 | Zn | 7 | qZn7.3 | RM501-OsZip2 | RILs | Madhukar/Swarna | Anuradha et al. (2012) | |
60 | Fe | 7 | qFe7.1 | RM234-RM248 | RILs | |||
61 | MAC-P | 7 | qP.7 | RM70-RM172 | DHs | IR64/Azucena | James et al. (2007) | |
62 | PC | 7 | qPC.1 | R1245-RM234 | RILs | Zhenshan97/Minghui 63 | Tan et al. (2001) | |
63 | PC | 7 | qPr7 | RM445-RM418 | RILs | Zhenshan97B/Delong 208 | Zhong et al. (2011) | |
64 | MIC-Zn | 8 | qZn8-1 | RM152 | ILs | O. rufipogon/Teqing | Garcia-Oliveira et al. (2008) | |
65 | AAC-Tyr | 8 | qAA.8 | RM137-RM556 | RILs | RM556 | Zhenshan97/Nanyangzhan | Wang et al. (2008) |
66 | AAC-Cys | 8 | qAA.8 | RM447-RM458 | RILs | RM447 | ||
67 | MAC-K | 8 | qK8-1 | RM3572 | ILs | O. rufipogon/Teqing | Garcia-Oliveira et al. (2008) | |
68 | Zn | 8 | qZn.8 | RM25-R1629 | RILs | Zhenshan 97/Minghui 63 | Kaiyang et al. (2008) | |
69 | Cu | 8 | qCu.8 | RM201-C472 | RILs | |||
70 | Fe | 8 | qFe.8 | RM137-RM325A | DHs | IR64/Azucena | James et al. (2007) | |
71 | AAC | 9 | qAa9 | RM328-RM107 | RILs | Zhenshan97B/Delong 208 | Zhong et al. (2011) | |
72 | MAC-P | 9 | qP9-1 | RM201 | ILs | O. rufipogon/Teqing | Garcia-Oliveira et al. (2008) | |
73 | MAC-Mg | 10 | qMg.10 | RM467 | LT-RILs | Lemont/TeQing | Zhang et al. (2014) | |
74 | AAC-Cys/Leu/Ile/Phe | 10 | qAA.10 | RM467-RM271 | RILs | RM271 | Zhenshan97/Nanyangzhan | Wang et al. (2008) |
75 | PC | 10 | qPC-10 | RM184-RM3229B | RILs | Xieqingzao B/Milyang | Yu et al. (2009) | |
76 | PC | 10 | qPro-10 | RM24934-RM25128 | DHs | RM24934 | Cheongcheong/Nagdong | Yun et al. (2014) |
77 | MAC-Mg | 11 | qMg.11 | RM332 | LT/TL-RILs | Lemont/TeQing | Zhang et al. (2014) | |
78 | MIC-Cu | 11 | qCu.11 | RM167 | LT-RILs | |||
79 | PC | 11 | qPC1.11 | 1027-RM287 | DHs | RM287 | Samgang and Nagdong | Qin et al. (2009) |
80 | Fe | 11 | qFe.11 | RZ536-TEL3 | RILs | Zhenshan 97/Minghui 63 | Kaiyang et al. (2008) | |
81 | PC | 11 | qPC1.11 | RM287-RM26755 | DHs | RM287 | Samgang and Nagdong | Qin et al. (2009) |
82 | PA | 12 | qPA.12 | RM247-RM179 | DHs | IR64/Azucena | James et al. (2007) | |
83 | Fe | 12 | qFe.12 | RM270-RM17 | DHs | |||
84 | Zn | 12 | qZn.12 | RM235-RM17 | DHs | |||
85 | Fe | 12 | qFe12.2 | RM260-RM7102 | RILs | Madhukar/Swarna | Anuradha et al. (2012) | |
86 | Fe | 12 | qFe12.1 | RM17-RM260 | RILs | |||
87 | Zn | 12 | qZn12.2 | RM260-RM7102 | RILs |