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Table 2 Sensitivity and specificity of multiplex rRT-PCR assay for 523 clinical specimens

From: Simultaneous detection of influenza A subtypes of H3N2 virus, pandemic (H1N1) 2009 virus and reassortant avian H7N9 virus in humans by multiplex one-step real-time RT-PCR assay

Virus

Culture

Multiplex

Reference

Sens. (%)

Spec. (%)

+

+

+

(95% CI)

(95% CI)

Flu A

125a

398

144

379

144

379

100 (100–100)

95.2 (93.1–97.3)

H1N1(2009)

28b

495

36 d

487

36e

487

100 (100–100)

98.4 (97.3–99.5)

H3N2

88c

435

101d

422

101e

422

100 (100–100)

97.0 (95.4–98.6)

H7N9

9

514

9

514

9

514

100 (100–100)

100 (100–100)

RP

523

523

523

100 (100–100)

100 (100–100)

  1. Values refer individually to the virus culture
  2. Sens. sensitivity, Spec. specificity, 95% CI 95% confidence interval [CI]
  3. aNineteen negative samples by cell culture consisted of eight pandemic H1N1 (2009) b and eleven H3N2 virus c by PCR and genomic sequence analysis. Indeterminate results were excluded from sensitivity and specificity calculations
  4. dTwo patients with H1N1(2009) virus-H3N2 virus coinfections, one was identified in throat swab specimen from patient with kidney transplantation history, the other was detected in sputum specimen from patient with multiple myeloma history. However, there was only H3N2 virus cultured in the two patients specimens, respectively