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TableĀ 1 List of genes located in E. japonica

From: Complete plastid genome of Eriobotrya japonica (Thunb.) Lindl and comparative analysis in Rosaceae

Group of genes Gene names
Ribosomal RNA genes rrn16 # ,rrn23 # ,rrn4.5 # ,rrn5 #
Transfer RNA genes trnA-UGC* # , trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnG-GCC*, trnG-UCC, trnH-GUG, trnI-CAU # , trnI-GAU* # , trnK-UUU*, trnL-CAA # , trnL-UAA*, trnL-UAG, trnM-CAU, trnfM-CAU, trnN-GUU # , trnP-UGG, trnQ-UUG, trnR-UCU, trnR-ACG # , trnS-UGA, trnS-GCU, trnS-GGA, trnT-GGU, trnT-UGU, trnV-UAC*, trnV-GAC # , trnW-CCA, trnY-GUA
Small subunit of ribosome rps2, rps3, rps4, rps7 # , rps8, rps11, rps12*, rps14, rps15, rps16*, rps18, rps19 #
Large subunit of ribosome rpl2* # , rpl14, rpl16*, rpl20, rpl22, rpl23 # , rpl32, rpl33, rpl36
DNA dependent RNA polymerase rpoA, rpoB, rpoC1*, rpoC2
Subunits of photosystem I psaA, psaB, psaC, psaI, psaJ
Subunits of photosystem II psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ
Subunits of cytochrome petA, petB*, petD*, petG, petL, petN
Subunits of ATP synthase atpA, atpB, atpE, atpF*, atpH, atpI
ATP-dependent protease clpP*
Large subunit of Rubisco rbcL
Subunits of NADH ndhA*, ndhB* # , ndhC, ndhD, ndhE, ndhF # , ndhG, ndhH, ndhI, ndhJ, ndhK
Maturase matK
Envelop membrane protein cemA
Subunit of Acetyl-CoA-carboxylase accD
c-Type cytochrome synthesis gene ccsA
Conserved open reading frames ycf1, ycf2 # , ycf3*, ycf4
  1. * Gene with intron
  2. #Gene duplicated in IR