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Table 1 Identification, origin, NCBI Genebank accession numbers, cell wall-degrading enzymes and antagonistic effect of Trichoderma isolates from tomato rhizosphere against fungal plant pathogens

From: Identification, characterization and phylogenetic analysis of antifungal Trichoderma from tomato rhizosphere

Code Isolate (s) Region GenBank accession Cell wall-degrading enzymes Mycelia inhibition over control (%)
EF-1α ERG1 Chitinasex β-1,3 glucanasey FOL AA CG RS
UNT60 Trichoderma harzianum U.S. Nagar, Uttarakhand KF360991 KT989041 *40.00 ± 1.42h 83.67 ± 1.95i 58.54 ± 2.41 g 58.89 ± 2.14i 59.80 ± 1.88 g 53.30 ± 1.99 g
UNT64 T. harzianum U.S. Nagar, Uttarakhand KF360992 KT989042 69.00 ± 3.54b 55.60 ± 0.85l 62.45 ± 1.56f 61.50 ± 1.91h 64.50 ± 2.11cd 62.78 ± 1.88bcd
UNT68 T. harzianum U.S. Nagar, Uttarakhand KF360993 KT989043 76.56 ± 3.95a 90.56 ± 0.88g 77.94 ± 2.21a 79.47 ± 1.88a 73.94 ± 1.88a 69.23 ± 1.35a
NAT69 T. harzianum Nanital, Uttarakhand KF360994 KT989044 53.33 ± 1.44e 53.33 ± 0.55n 57.65 ± 1.12g 53.98 ± 1.34j 59.50 ± 1.77g 54.80 ± 1.66g
NAT70 T. harzianum Nanital, Uttarakhand KF360995 KT989045 37.00 ± 1.20i 137.42 ± 0.65e 62.34 ± 1.21f 62.50 ± 1.99gh 60.89 ± 1.55fg 62.79 ± 1.64bcd
ALT73 T. harzianum Almora, Uttarakhand KF360996 KT989046 49.67 ± 2.01f 47.67 ± 0.44p 65.78 ± 1.54e 53.68 ± 1.86j 64.70 ± 1.66cd 63.65 ± 1.94b
DET89 T. harzianum Dehradun, Uttarakhand KF360997 KT989047 67.00 ± 3.93b 91.66 ± 1.99g 61.98 ± 1.34f 67.87 ± 1.54d 62.56 ± 1.35e 58.83 ± 1.51e
DET94 T. harzianum Dehradun, Uttarakhand KF360998 KT989048 69.00 ± 4.10b 171.66 ± 1.01b 74.35 ± 1.14b 65.50 ± 1.99e 68.89 ± 2.01b 67.89 ± 1.35a
HAT96 T. harzianum Haridwar, Uttarakhand KF360999 KT989049 73.60 ± 3.35a 63.26 ± 0.971 68.95 ± 1.21d 63.45 ± 1.35 fg 60.54 ± 1.35fg 61.11 ± 1.91cd
UNT38 T. koningii U.S. Nagar, Uttarakhand KF361001 KT989051 74.60 ± 3.55a 134.61 ± 1.06f 70.73 ± 1.12c 69.80 ± 1.36c 68.90 ± 1.55b 64.78 ± 1.35b
UNS63 T. koningii U.S. Nagar, Uttarakhand KF361002 KT989052 39.00 ± 1.99h 89.33 ± 1.04h 52.98 ± 1.33i 56.89 ± 1.25i 56.90 ± 1.97h 59.80 ± 2.11de
UNT13 T. asperellum U.S. Nagar, Uttarakhand KF361003 KT989053 56.56 ± 2.44d 51.26 ± 0.95o 55.80 ± 1.21h 61.89 ± 1.44h 62.80 ± 1.25e 59.80 ± 1.87de
UNT70 T. asperellum U.S. Nagar, Uttarakhand KF361004 KT989054 54.33 ± 1.66e 34.33 ± 0.65q 53.90 ± 1.44i 59.98 ± 0.99h 60.70 ± 1.35fg 62.89 ± 1.76bcd
UNS28 T. virens U.S. Nagar, Uttarakhand KF361005 KT989055 61.00 ± 1.32c 78.35 ± 0.78j 64.30 ± 1.31e 67.50 ± 1.34d 65.80 ± 1.97c 60.80 ± 1.54cde
UNS30 T. virens U.S. Nagar, Uttarakhand KF361006 KT989056 73.67 ± 2.12a 175.1 ± 1.20a 70.89 ± 1.21c 75.60 ± 1.65b 65.70 ± 1.54c 64.58 ± 1.62b
NAS46 T. virens Nanital, Uttarakhand KF361007 KT989057 44.00 ± 1.19g 54.22 ± 0.55mn 65.80 ± 1.33e 60.80 ± 1.21hi 59.80 ± 1.35g 57.50 ± 1.31ef
ALS47 T. virens Almora, Uttarakhand KF361008 KT989058 57.00 ± 2.37d 72.52 ± 0.72k 69.00 ± 1.54d 65.78 ± 1.35e 61.90 ± 1.67e 62.80 ± 1.15bc
UNT09 T. viride U.S. Nagar, Uttarakhand KF361011 KT989061 59.90 ± 1.15c 56.55 ± 0.96l 67.83 ± 1.34d 64.45 ± 1.44ef 60.85 ± 1.88efg 60.70 ± 1.25cde
DET02 T. viride Dehradun, Uttarakhand KF361012 KT989062 31.00 ± 1.25j 163.33 ± 1.22c 72.05 ± 1.68c 68.89 ± 1.55cd 64.44 ± 1.66cd 60.35 ± 1.35cde
NAT03 T. viride Nanital, Uttarakhand KF361013 KT989062 61.67 ± 2.03c 151.67 ± 1.10d 61.80 ± 1.34f 64.50 ± 1.39ef 59.48 ± 1.95g 60.45 ± 1.75cde
  1. * Within columns, mean ± SE values with a common letter do not differ significantly (P < 0.05), according to DMRT test
  2. xμmol of GlcNAc min−1 mg−1 protein
  3. ynmol of glucose min−1 mg−1 protein