Table 4 Recombination analysis between Singapore and Guangdong strains
From: Molecular characterization and phylogenetic analysis of dengue virus type 1 in Guangdong in 2014
Strain | NT position | Major parent | Minor parent | Av.P-Val methods | |||||
|---|---|---|---|---|---|---|---|---|---|
RDP | GENECONV | MaxChi | Chimaera | SiScan | 3Sep | ||||
FJ196847-Guangdong-1997 | 994–1701 | EU081274 | FJ196842 | 4.882 × 10−9 | 4.852 × 10−9 | 8.131 × 10−9 | 3.788 × 10−9 | 3.350 × 10−17 | 3.844 × 10−40 |
2238–7197 | EF025110 | EU081234 | 3.415 × 10−13 | 7.161 × 10−10 | 7.79 × 10−19 | 3.318 × 10−19 | 1.389 × 10−28 | 9.458 × 10−48 | |
7617–8231 | A75711 | FJ196846 | 1.04 × 10−2 | 3.721 × 10−4 | 1.21 × 10−4 | 9.047 × 10−5 | 9.28 × 10−9 | 2.032 × 10−4 | |
8887–10675 | FJ196844 | FJ196846 | 6.537 × 10−25 | 7.002 × 10−23 | 3.198 × 10−10 | 1.354 × 10−7 | 7.451 × 10−35 | 4.79 × 10−13 | |
FJ196848–Guangdong-1999 | 1187–1754 | EU081274 | FJ196842 | 4.882 × 10−9 | 4.582 × 10−9 | 80131 × 10−9 | 3.788 × 10−9 | 3.35 × 10−17 | 3.844 × 10−4 |
1626–5978 | EF025110 | EU081234 | 3.415 × 10−13 | 7.161 × 10−10 | 7.79 × 10−19 | 3.318 × 10−19 | 1.369 × 10−28 | 9.458 × 10−48 | |
4604–4870 | A75711 | EU081258 | 4.921 × 10−3 | 2.891 × 10−5 | |||||
7995–8851 | KF971869 | FJ196847 | 1.061 × 10−2 | 1.681 × 10−4 | 1.286 × 10−2 | 2.253 × 10−3 | 4.58 × 10−13 | 2.699 × 10−2 | |
8914–9201 | GZ02 | FJ196846 | 3.213 × 10−4 | 2.303 × 10−6 | 2.503 × 10−8 | ||||
EF032589-Guangdong-2004 | 1300–2514 | EF025110 | EU081234 | 3.415 × 10−13 | 7.161 × 10−10 | 7.79 × 10−19 | 3.318 × 10−19 | 1.369 × 10−28 | 9.458 × 10−48 |