‘Jones hybrid’ hickory: a case study in Carya curation

Grauke, L. J.; Mendoza-Herrera, M. Azucena; Stelly, David M.; Klein, Patricia E.

doi:10.1186/s40064-016-3531-4

SpringerPlus

Table 2 Nuclear microsatellite alleles in base pairs, alleles arranged vertically by locus for Carya species from diverse geographic regions, presented by species within Section and hybrid group

From: ‘Jones hybrid’ hickory: a case study in Carya curation

Sample	Section	Spp	State	Accession	cin22	cin13	cin20	cin4	cin23	ca10	ga38	ga39	ga41	wga242	wga118	wga321	wga4	A05
LJ06-49	apo	cor	LA	02-COR-LA-BF-1	117	126	141	99	83	133	111	112	122	207	177	221	248	110
					117	126	141	99	83	139	111	126	132	211	223	221	270	115
LJ06-50	apo	cor	LA	02-COR-LA-BF-2	117	126	141	90	74	133	111	110	100	209	165	223	258	115
					117	126	141	138	74	139	111	132	100	211	181	223	268	120
LJ06-181	apo	cor	NY	06-COR-NY-1	117	126	141	105	74	139	111	–	106	207	181	221	254	110
					117	126	141	138	83	139	111	–	120	211	193	221	254	115
LJ98-33	apo	cor	KS	90-COR-KS-2	117	126	141	99	74	133	111	112	90	209	173	221	256	105
					117	126	141	99	74	133	111	112	108	223	183	223	260	105
LJ09-903	apo	cor	NY	Schreiner/Stone COR	117	–	141	105	74	139	111	110	90	209	177	221	268	115
					117	–	141	105	83	139	111	110	94	217	177	221	274	115
LJ06-18	apo	ill	TX	Western	114	120	138	93	83	115	117	86	104	213	171	235	242	160
					114	135	138	108	83	115	123	86	104	219	189	259	244	165
LJ06-62	apo/apo	xbr	IL	Abbott Thinshell	114	132	138	93	83	115	109	82	106	207	173	211	242	115
					117	132	141	99	89	133	111	82	106	219	185	257	270	160
LJ06-105	apo/apo	xbr	OK	Pleas	114	132	138	114	83	115	111	96	104	203	175	221	244	115
					117	132	141	144	83	139	129	96	118	209	191	237	244	160
LJ10-4160	apo/car	xio	MX	Stone 4160	108	132	138	93	80	85	111	86	94	217	177	247	228	105
					114	132	138	108	80	115	115	96	104	233	179	247	240	160
								114
LJ06-55	apo/car	xio	TX	89-XIO-RDM-1	108	120	138	108	80	85	111	86	92	205	175	225	230	105
					114	120	138	108	83	115	117	94	104	219	189	259	242	160
LJ06-115	apo/car	xla	KY	Jones Hybrid	108	132	138	108	80	85	111	98	94	217	175	219	234	105
					108	132	138	117	80	115	111	100	100	243	191	219	240	105
LJ06-180	apo/car	xla	NY	C– × laneyi type	108	120	138	99	89	85	111	108	120	207	169	223	238	110
					117	126	138	138	89	139	111	114	120	209	169	225	280	110
LJ06-42	apo/car	xnu	IN	McCallister	114	132	138	102	80	85	111	88	104	203	165	233	228	105
					114	132	138	102	83	115	115	104	114	231	177	239	250	160
LJ06-114	apo/car	xnu	MO	Wilson	114	129	138	105	80	85	111	104	106	227	169	229	228	105
					114	129	138	108	83	115	111	110	114	231	175	255	242	150
LJ01-453	car	lac	KY	Stevens (LAC)	114	132	138	105	83	85	111	94	94	227	171	229	226	100
					114	132	141	120	83	85	115	104	102	245	177	235	228	110
LJ98-36	car	lac	IN	Stephens(LAC)	114	123	138	96	80	85	111	96	94	227	171	229	226	100
					114	129	141	99	80	115	111	104	102	245	177	235	228	105
LJ06-43	car	lac	–	Nieman	108	132	138	93	80	85	111	102	92	213	179	229	228	105
					114	132	144	93	80	85	111	104	94	215	179	233	228	110
LJ06-44	car	lac	IL	Lindauer	114	132	138	93	80	85	109	94	92	225	183	229	228	105
					114	132	138	93	80	115	111	94	102	225	191	233	228	105
LJ09-905	car	ovt	NY	Schreiner/Stone OVT	108	129	138	114	80	85	111	94	90	233	163	219	226	100
					108	129	138	120	80	85	111	96	94	235	173	251	226	105
LJ10-103	car	ovt	TX	10OVT-6	108	129	138	123	80	85	111	94	94	225	163	219	226	105
					111	129	138	123	80	117	111	94	94	225	175	229	226	105
LJ10-104	car	ovt	TX	10OVT-W1	108	129	138	123	80	85	111	94	94	225	163	219	226	105
					111	129	138	123	80	117	111	94	94	225	175	229	226	105
LJ06-89	car	ovt	LA	01-OVT-LA-2–1	108	129	138	108	80	85	111	94	94	213	173	219	226	105
					108	129	138	117	80	139	111	96	124	213	175	221	234	110
LJ98-38	car	ovt	LA	91-OVT-LA-1	108	129	138	93	80	85	111	94	92	225	163	219	230	105
					108	132	138	120	80	115	111	96	92	225	183	239	230	105
LJ06-67	car	ovt	PA	Seas	108	120	138	93	80	85	111	96	94	221	175	219	226	105
					114	120	138	93	80	85	111	104	94	221	179	235	234	110
LJ10-4131	car	ovt	MX	Stone 4131	108	129	138	99	80	85	111	94	94	223	169	225	228	105
					108	129	138	114	80	85	111	96	134	225	187	233	228	110
LJ10-4161	car	ovt	MX	Stone 4161	108	126	138	114	80	85	111	96	94	217	169	225	226	105
					111	132	138	123	80	139	111	96	94	219	173	241	228	105
LJ06-102	car	ovt	TN	Grainger	108	126	138	105	80	85	109	94	94	209	183	225	226	105
					114	129	138	114	80	85	111	102	106	227	191	231	244	105
								117
								120
LJ06-113	car	ovt	OH	Yoder 1	108	120	138	108	80	115	109	102	94	229	171	235	226	105
					114	132	138	108	80	115	111	102	94	229	185	245	234	105
LJ06-100	car	ovt	IL	01-OVT-IL-8–3	108	129	138	117	80	85	109	100	96	219	163	223	228	105
					114	129	138	117	80	85	111	100	106	225	177	223	228	105
LJ09-1816	car	tom	MO	Scarit 1816 TOM	108	120	138	108	80	85	111	104	94	–	169	225	238	110
					114	132	141	120	89	115	111	110	104	–	179	233	240	115
								126								237	244	120
																253
LJ09-1814	car	tex	MO	Scarit 1814 TEX	108	–	141	98	80	85	107	100	94	–	167	225	226	110
					108	–	144	108	80	115	111	100	104	–	169	233	254	115
								129			113				171	237
															179
LJ09-828	car	flo	FL	09FLA-ABS1	108	120	138	99	77	115	111	98	94	217	171	225	234	–
					108	132	141	99	80	139	111	102	112	223	181	227	238	–
						138	144							227	185		248
														233			290
LJ09-1812	car/car	xco	MO	Scarit 1812 XCO	108	120	138	102	77	85	111	–	90	–	175	–	226	105
					114	132	138	114	80	115	119	–	104	–	175	–	228	115

Profiles for Stone 4131, 4160 and 4161, are matched by herbarium vouchers with those numbers in the Duke Herbarium
Profiles for Scarit 1812, 1814 and 1816 are matched by herbarium vouchers with those numbers in the Duke Herbarium
Section Apocarya = apo; Section Carya = car; hybrids by Sections = apo/apo, apo/car, or car/car; Species: C. aquatica = aqu; C. cordiformis = cor; C. illinoinensis = ill, C. floridana = flo; C. laciniosa = lac; C. ovata = ovt; C. texana = tex; C. tomentosa = tom; C. × brownii = xbr (ill × cor); C. × collina = xco (tom × tex), C. illinoinensis × C. ovata = xio, C. × nussbaumeri = xnu (lac × ill), C. × laneyi = xla (cor × ovt)

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