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Table 1 Sequences of primers for PCR amplification

From: SOCS3 mRNA expression and polymorphisms as pretreatment predictor of response to HCV genotype 3a IFN-based treatment

No

Gene

Primer

Product size

1.

rs12952093-1

AACACTTGTTTTTTGTTTGACACAGTACCC

Common amplicon = 449 bp

C allele = 204 bp

A allele = 294 bp

rs12952093-2

CACTCCAGCCTGGGCAACAAAT

rs12952093-3

CTCCCCCGATAATTGCAAACAAAAT

rs12952093-4

AACATGGCAAACACCGTCTCTACCT

2.

rs4969170-1

TCTTTCCATTGTTTTTAGAGACCCCA

Common amplicon = 375 bp

G allele = 235 bp

A allele = 196 bp

rs4969170-2

AACCAAAAAGTACTCTAGAAGAAAGCATGC

rs4969170-3

AAAGACGGAAAAAGGCAGACACTCT

rs4969170-4

CCACATTTTCAGAAACGTTTTCGTC

3.

rs4969168-1

AGACCAGCTGACCAGCCCATACA

Common amplicon = 211 bp

A allele = 120 bp

G allele = 138 bp

rs4969168-2

GGGGAAGCAACATTTGGAGGGTAC

rs4969168-3

ACCAGGAGCCTGAGGTGAAAGATGT

rs4969168-4

GACAGTCACCGAAAACACAGGTTCC

4.

SOCS3-F

GGAGACTTCGATTCGGGACC

131 bp

SOCS3-R

GAAACTTGCTGTGGGTGACC

5.

STAT3-F

GGCATTCGGAAAGTATTGTCG

265 bp

STAT3-R

GGTAGGCGCCTCAGTCGTATC

6.

GAPDH-F

ACCACAGTCCATGCCATCAC

453 bp

GAPDH-R

TCCACCACCCTGTTGCTGTA