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Table 2 Probe sequences for microarray

From: Genotyping and detection of common avian and human origin-influenza viruses using a portable chemiluminescence imaging microarray

Probe

Sequence (5′–3′)b

Target

Gene

Location

Referencea

H7-a

ACTGGACCACCCCAATGTGACCAATTCCTAGAATTT

H7N9

HA

235–270

CY146908

H7-b

ATAGGACCTCCCCAATGCGATCAATTTCTGGAGTTT

H7N9

HA

235–270

CY146908

N9

GGAAACACTCAAACGGAACAATACACGATAGGTCCCAGTA

H7N9

NA

413–452

CY146910

PH1N1

GGCTCGAATCGACCGTGGGT

PH1N1

NA

912–931

CY081570

H1N1

CAATCCAGTGACTGTTGATGGAGCAA

H1N1

NA

1025–1050

AJ006954

H3N2

TAACATTACAGGATTTGCACCTTTTTC

H3N2

NA

295–321

CY091836

H5N1-a

CAAATAGGCCATGGGTATCTTTCAATC

H5N1

NA

856–882

AM183680

H5N1-b

GTGTCCCCTAACGGGGCATATGGGG

H5N1

NA

972–996

AM183680

A

CTCATGGAATGGCTAAAGACAAGACCAA

Influenza A

M

149–176

HQ664927

B

AATGAAGGACATTCAAAGCCAATTCGAGCAGCTGAAACTGCG

Influenza B

NS

775–816

CY099917

RP-P

TTCTGACCTGAAGGCTCTGCGCGCG

Human

RNase P

71–95

NM_006413

RP-P1

CATGAACCCAGGAGGCGGAGCTTGC

Human

RNase P

1995–2019

NM_006413

PR-P4

ACATGCATTTATGCAATATTAATGT

Human

RNase P

1859–1883

NM_006413

(T)20

TTTTTTTTTTTTTTTTTTTT

Quality controlc

   
  1. aThe numbers are NCBI accession codes
  2. bA repeat sequence of (T)12 with an amino-labeled 3′-end was connected to the 3′-end of all the probes
  3. cA repeat sequence of (T)20 with an amino-labeled 3′-end and biotin-labeled 5′-end was used for quality control during microarray