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Fig. 5 | SpringerPlus

Fig. 5

From: Population genetic analysis reveals a low level of genetic diversity of ‘Candidatus Phytoplasma aurantifolia’ causing witches’ broom disease in lime

Fig. 5

UPGMA tree showing the analysis of 57 phytoplasma strains from Oman, the UAE and Iran based on the concatenated sequences of 16S rRNA, secA and imp genes. The total length of the concatenated sequences is 2239. GenBank accession numbers for the three genes of the 57 strains are listed in Table 1. The tree was prepared based on the matrix of pairwise distances using the Kimura 2 parameter evolutionary model. Bootstrap values above 50 % are shown (1000 replications). All positions containing gaps and missing data were eliminated. The units indicate the number of base substitutions per site

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