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Table 1 Molecular data: The genotype of 60 SSR loci and five chloroplast SSR loci of the analyzed varieties for the proposed kinship and of Pinot Noir as reference for size calibration

From: The molecular characterization by SSRs reveals a new South Italian kinship and the origin of the cultivar Uva di Troia

SSR loci Uva rosa antica Quagliano Bombino bianco Uva di Troia Bombino nero Impigno Pinot Noir
VVS2 133–143 145–151 143–151 133–145 133–145 137–151
VVMD5 225–225 227–231 225–231 225–227 225–227 227–237
VVMD7 238–242 248–252 242–252 238–252 238–248 238–242
VVMD25 239–267 241–263 263–267 239–241 239–241 239–249
VVMD27 178–188 180–194 188–194 178–180 178–194 184–188
VVMD28 249–259 245–249 245–249 249–249 249–249 219–237
VVMD32 240–250 258–272 250–272 240–258 250–272 240–272
VrZAG21 191–205 191– 191 191–191 191–205 191–191 201–207
VrZAG62 185–187 189–199 187–199 185–199 185–189 187–193
VrZAG79 250–254 250–258 250–250 254–258 254–258 240–244
ISV2 166–170 166–170 170–170 166–166 166–170 152–166
ISV3 134–140 140–146 140–140 140–140 140–140 134–146
ISV4 189–199 189–193 189–199 189–189 189–189 171–179
VMCNG4b9 162–164 150–176 164–176 162–176 162–176 158–162
VChr-1b 96–108 100–100 96–100 96–100 100–108 100–108
VChr-2b 116–124 116–124 116–124 116–124 116–124 124–124
VChr-4a 182–199 182–199 199–199 182–182 182–199 182–199
VChr-5b 202–218 202–206 206–218 202–202 202–202 190–190
VChr-5c 104–128 88–120 88–128 104–120 88–104 96–116
VChr-6a 182–186 182–182 182–182 182–186 182–186 182–186
VChr-7b 181–185 181–189 181–185 181–186 181–189 181–189
VChr-9a 90–118 109–115 90–115 90–115 115–118 90–98
VChr-10b 134–134 138–144 134–138 134–144 134–144 138–144
VChr-11b 155–160 157–164 160–164 155–157 155–164 152–164
VChr-12a 137–144 144–144 144–144 144–144 144–144 137–144
VChr-13a 141–157 149–157 157–157 141–149 149–157 157–157
VChr-15a 157–157 149–149 149–157 149–157 149–157 153–157
VChr-16a 110–114 114–114 110–114 110–114 110–114 102–164
VChr-17a 181–// 189–189 189–// 189–// 181–189 189–189
VChr-18a 164–168 152–160 160–168 152–164 152–168 164–168
VChr-19a 141–141 138–141 141–141 138–141 138–141 123–138
VVI-b01 298–298 294–298 294–298 294–298 294–298 292–298
VVI-b63 150–154 126–154 126–154 126–154 150–154 148–148
VVI-b94 292–306 284–292 292–306 292–306 284–306 284–296
VVI-f52 262–274 260–260 260–262 260–274 260–262 284–286
VVI-h54 166–168 166–174 166–166 166–174 166–166 164–168
VVI-i51 253–265 263–263 253–263 263–265 263–265 265–267
VVI-m10 357–371 369–379 371–379 357–379 357–369 357–371
VVI-m11 291–301 287–301 287–291 301–301 291–301 291–291
VVI-m25 167–169 177–177 171–177 169–177 167–177 167–187
VVI-n54 100–106 106–112 106–112 106–106 106–106 92–96
VVI-n61 361–375 349–371 349–361 361–371 349–375 371–377
VVI-n94 278–289 286–289 278–289 286–289 289–289 289–289
VVI-o55 141–143 143–147 141–147 141–147 141–147 143–147
VVI-p25b 342–360 340–362 360–362 340–342 360–362 362–362
VVI-p37 150–156 144–148 144–150 148–156 144–150 140–150
VVI-p77 172–182 186–190 172–190 182–186 172–190 180–190
VVI-r09 258–260 258–264 258–264 258–260 258–258 242–248
VVI-s21 284–284 284–290 284–284 284–290 284–284 270–284
VVI-s58 304–308 304–308 308–308 304–308 304–304 294–294
VVI-s63 190–212 190–212 190–212 190–190 190–212 190–190
VVI-u04 182–189 182–191 182–191 182–191 182–189 166–170
VVI-v37 159–167 159–167 159–167 159–167 167–167 149–159
VVI-v69 271–271 257–271 257–271 257–271 257–271 289–291
ccSSR-5 256 255 255 255 255 256
ccSSR-14 201 202 202 202 202 201
ccSSR-23 285 286 286 286 286 285
cpSSR10 110 111 111 111 111 110
NTCP8 250 250 250 250 250 250
VChr-3a 190–190 187–199 190–199 187–190 187–190 202–202
VChr-8b 121–136 103–106 106–121 103–136 103–136 103–139
VrZAG112 231–235 237–245 231–237 231–237 231–237 243–245
VVI-b23 305–323 305–311 305–305 305–305 305–305 309–331
VVI-b66 89–89 89–109 89–109 89–109 89–109 103–109
VVI-v61 169–190 169–192 169–190 169–192 169–190 169–169
  1. The last six loci were analyzed only in the five members of the proposed family. Allele lengths are in bp. ND: not detected