Table 4 Molecular characterization (near full 16S rDNA and partial ITS) of bacteria associated with Tuber spp. mycelial cultures
Bacterial isolate | 16S sequence length (bp) | Accession no | Closest BLASTn (accession No) | Identity (%) | ITS sequence length (bp) | Accession no | Closest BLASTn (accession No) | Identity (%) |
|---|---|---|---|---|---|---|---|---|
BBTR3 | 1358 | KM597510 | Rhodopseudomonas sp. (AJ968691) | 100 | 784 | KM597522 | Bradyrhizobium sp. (EU288750) | 96 |
BMel14 | 601 | KM597518 | Rhodopseudomonas sp. (KF663061) | 99 | nd | nd | nd | nd |
BMel18 | 1358 | KM597517 | Rhodopseudomonas sp. (AJ968691) | 100 | 782 | KM597527 | Bradyrhizobium sp. (EU288750) | 96 |
BMel28 | 1358 | KM597515 | Rhodopseudomonas sp. (AJ968691) | 100 | 784 | KM597525 | Bradyrhizobium sp. (EU288750) | 96 |
BMel2VDA3 | 1358 | KM597512 | Rhodopseudomonas sp. (AJ968691) | 100 | 771 | KM597528 | Bradyrhizobium sp. (EU288750) | 93 |
BMel3VDA4 | 1353 | KM597507 | Rhodopseudomonas sp. (AJ968691) | 99 | 767 | KM597519 | Bradyrhizobium sp. (EU288750) | 90 |
BMelBal1 | 1356 | KM597513 | Rhodopseudomonas sp. (KF663061) | 99 | 761 | KM597529 | Bradyrhizobium sp. (EU288750) | 83 |
BMelBal3 | 1329 | KM597508 | Rhodopseudomonas sp. (KF663061) | 99 | 759 | KM597520 | Bradyrhizobium sp. (EU288750) | 83 |
BMelC89 | 1356 | KM597511 | Rhodopseudomonas sp. (KF663061) | 99 | 765 | KM597523 | Bradyrhizobium sp. (EU288750) | 83 |
BMelCR2-00 | 1406 | KM597514 | Rhodopseudomonas sp. (KF663061) | 99 | 759 | KM597524 | Bradyrhizobium sp. (EU288750) | 83 |
BMelBaud1 | 1333 | KM597509 | Rhodopseudomonas sp. (AJ968691) | 100 | 771 | KM597521 | Bradyrhizobium sp. (EU288750) | 93 |
BTBRS | 1358 | KM597516 | Rhodopseudomonas sp. (AJ968691) | 100 | 768 | KM597526 | Bradyrhizobium sp. (EU288750) | 93 |