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Table 4 Genes for tRNA posttranscriptional modification in S. coelicolor and S. albus genomes

From: Decoding options and accuracy of translation of developmentally regulated UUA codon in Streptomyces: bioinformatic analysis

Protein

S. coelicolor A3(2) homolog

S. albus J1074 homolog

Annotation

IscS

SCO5486

XNR_1347

tRNAsulfurtransferase, PLP-dependent

IscU

SCO1920

XNR_4942

iron-sulfur cluster assembly enzyme

TruA

SCO4731

XNR_3758

tRNApseudouridine(38-40) synthase

TruB

SCO5709

XNR_1143

tRNApseudouridine synthase B

TruC

SCO1625

XNR_4806

tRNApseudouridine synthase C

DusB

SCO2497

XNR_4421

tRNA-dihydrouridine synthase B

TrmA

SCO5901

XNR_0992

tRNAm5(U34)methyltransferase

TrmB

SCO4111

XNR_2813

tRNA (guanine-N(7)-)-methyltransferase

TrmD

SCO5594

XNR_1214

tRNA m(1)G37 methyltransferase, SAM-dependent

TrmH

SCO4236

XNR_2558

tRNA mG18-2’-O-methyltransferase, SAM-dependent

RluA

SCO2073

XNR_4806

23S rRNApseudouridine(746), tRNApseudouridine(32) synthase, SAM-dependent

TadA

SCO4038

XNR_2881

tRNA-specific adenosine deaminase

FolE

SCO3403

XNR_3431

GTP cyclohydrolase I

QueA

SCO1804

XNR_5018

S-adenosylmethionine:tRNAribosyltransferase-isomerase

MnmA

SCO5488

XNR_1345

tRNA(Gln,Lys,Glu) U34 2-thiouridylase

MiaA

SCO5791

XNR_1074

delta(2)-isopentenylpyrophosphatetRNA-adenosine transferase

MiaB

SCO5787

XNR_1078

tRNA-i(6)A37 methylthiotransferase

AroA

SCO6819

XNR_1588

5-Enolpyruvylshikimate-3-phosphate synthetase

AroB

SCO1494

XNR_5357

3-Dehydroquinate synthase

AroC

SCO1496

XNR_5355

Chorismate synthase

AroE

SCO1498

XNR_5354

Dehydroshikimatereductase, NAD(P)-binding

AroD

SCO1961

XNR_4909

3-Dehydroquinate dehydratase

AroK

SCO1495

XNR_5356

Shikimate kinase I

TsaA

SCO5032

XNR_4120

tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase, SAM-dependent

TsaB

SCO4750

XNR_3789

tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; binding partner and protease for TsaD

TsaC

SCO5362

XNR_1471

t(6)A37 threonylcarbamoyladenosine biosynthesis protein

TsaD

SCO4752

XNR_3791

tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; glycation binding protein

TsaE

SCO4747

XNR_3786

tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; ADP binding protein

TilS

SCO3406

XNR_3428

tRNA(Ile)-lysidinesynthetase