| Crop | Ileum | Cecum | ||||||
---|---|---|---|---|---|---|---|---|---|
Abundance (%) | r | P | Abundance (%) | r | P | Abundance (%) | r | P | |
Phylum | |||||||||
 Actinobacteria | 1.18 | −0.65 | 0.003 | 0.95 | 0.08 | 0.729 | 1.05 | 0.00 | 0.990 |
 Bacteroidetes | 13.93 | 0.66 | 0.002 | 22.15 | 0.30 | 0.192 | 30.49 | <0.01 | 0.990 |
 Euryarchaeota | 0.08 | 0.52 | 0.023 | 0.19 | 0.52 | 0.018 | 0.16 | 0.14 | 0.558 |
 Firmicutes | 59.62 | −0.21 | 0.392 | 64.15 | −0.36 | 0.119 | 58.37 | 0.06 | 0.812 |
 Proteobacteria | 7.89 | −0.17 | 0.482 | 4.26 | 0.10 | 0.672 | 3.06 | −0.17 | 0.472 |
 Spirochaetes | 0.37 | 0.33 | 0.172 | 0.43 | 0.47 | 0.035 | 0.46 | 0.23 | 0.323 |
 Verrucomicrobia | 0.09 | 0.30 | 0.208 | 0.06 | −0.10 | 0.690 | 0.22 | −0.41 | 0.073 |
Genus | |||||||||
 Akkermansia a | 0.05 | 0.09 | 0.706 | 0.04 | −0.51 | 0.023 | 0.08 | −0.55 | 0.022 |
 Anaerovibrio | 0.35 | 0.20 | 0.413 | 0.44 | −0.20 | 0.398 | 0.29 | −0.81 | <0.001 |
 Bacteroides | 4.22 | 0.54 | 0.016 | 7.54 | 0.05 | 0.834 | 12.59 | −0.34 | 0.142 |
 Bifidobacterium | 0.84 | −0.64 | 0.003 | 0.61 | 0.49 | 0.029 | 0.77 | 0.01 | 0.981 |
 Faecalibacterium | 1.14 | 0.65 | 0.003 | 1.47 | 0.23 | 0.335 | 4.62 | 0.32 | 0.164 |
 Lactobacillus | 28.62 | −0.39 | 0.099 | 30.81 | −0.32 | 0.172 | 18.12 | 0.02 | 0.924 |
 Lactococcus | 0.09 | 0.24 | 0.315 | 0.05 | 0.16 | 0.490 | 0.03 | 0.59 | 0.006 |
 Methanobrevibacter | 0.08 | 0.52 | 0.024 | 0.16 | 0.56 | 0.010 | 0.15 | 0.18 | 0.435 |
 Prevotella | 3.94 | 0.15 | 0.542 | 5.66 | 0.34 | 0.145 | 4.26 | −0.59 | 0.006 |
 Ruminococcus | 0.99 | 0.72 | <0.001 | 1.24 | 0.08 | 0.746 | 1.85 | −0.35 | 0.132 |
 Streptococcus | 1.18 | 0.03 | 0.913 | 1.11 | −0.81 | <0.001 | 0.75 | −0.06 | 0.787 |