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Table 2 Relative abundance of genera found in each section of the GIT

From: Relationship between the microbiota in different sections of the gastrointestinal tract, and the body weight of broiler chickens

Genus

Abundance (%)

SD1

P value

Crop

Ileum

Cecum

Bacillus

4.34a

1.50b

1.37b

0.85

<0.001

Bacteroides

4.22a

7.54b

12.59c

2.66

<0.001

Oscillospira

1.00a

1.34a

2.38b

0.49

<0.001

Faecalibacterium

1.14a

1.47a

4.62b

1.30

<0.001

Blautia

0.22a

0.27a

0.44b

0.10

<0.001

Dorea

0.21a

0.30a

0.45b

0.12

<0.001

Ruminococcus

0.99a

1.24a

1.85b

0.43

<0.001

Desulfovibrio

0.09a

0.22b

0.13a

0.07

<0.001

Lactobacillus

28.62a

30.81a

18.12b

7.77

<0.001

Bilophila

0.03a

0.04a

0.10b

0.04

<0.001

Coprococcus

0.17a

0.23a

0.34b

0.11

<0.001

Staphylococcus

1.56a

1.18a

0.67b

0.60

<0.001

Streptococcus

1.18a

1.11a

0.75b

0.32

<0.001

Clostridium

0.96a

0.79ab

0.60b

0.27

<0.001

Pediococcus

0.07a

0.06a

0.04b

0.02

0.001

Prevotella

3.94a

5.66b

4.26a

1.55

0.003

Akkermansia

0.05a

0.04a

0.20b

0.20

0.033

Methanobrevibacter

0.08a

0.16b

0.15ab

0.11

0.045

Selenomonas

0.10a

0.09ab

0.06b

0.05

0.046

Bifidobacterium

0.84

0.61

0.77

0.33

0.077

Enterococcus

0.50

0.84

0.47

0.53

0.077

Lactococcus

0.09

0.05

0.03

0.16

0.489

n

19

20

20

  
  1. One-way ANOVA with Tukey’s post hoc test was used. Within a row, different superscript letters indicate significant difference (P < 0.05)
  2. 1Pooled standard deviation