Table 5 List of non-coding SNPs except of 3′ UTR screened based on all the tools used
From: A comprehensive in silico analysis of non-synonymous and regulatory SNPs of human MBL2 gene
Region | Snp ID | FuncPred | RegulomeDB score | cSNPs | Selected |
|---|---|---|---|---|---|
5′ near gene | rs7095891 | ✓ | 4 | ✓ | * |
rs11003123 | ✓ | 4 | ✓ | * | |
rs7096206 | ✓ | 1f | ✓ | * | |
rs10556764 | – | 3a | ✓ | – | |
rs36014597 | ✓ | 4 | ✓ | * | |
rs7084554 | ✓ | 3a | ✓ | * | |
rs11003124 | ✓ | 5 | ✓ | * | |
rs11003125 | ✓ | 5 | ✓ | * | |
rs920724 | ✓ | – | ✓ | – | |
rs7916582 | ✓ | – | ✓ | – | |
rs10824794 | ✓ | 6 | ✓ | – | |
rs10824795 | ✓ | – | ✓ | – | |
rs1031101 | ✓ | 6 | ✓ | – | |
Intronic | rs1982266 | ✓ | 6 | ✓ | – |
rs17334270 | ✓ | 5 | ✓ | – | |
rs13312736 | ✓ | 4 | ✓ | – | |
rs4647964 | – | 5 | ✓ | – | |
rs1838065 | – | 5 | ✓ | – | |
rs1838066 | – | 5 | ✓ | – | |
rs34130848 | – | 5 | ✓ | – | |
rs4935046 | – | 5 | ✓ | – | |
rs930508 | – | 3a | ✓ | – | |
rs930509 | – | 4 | ✓ | – |