A comprehensive in silico analysis of non-synonymous and regulatory SNPs of human MBL2 gene

SpringerPlus

Table 1 List of non-coding SNPs predicted by FuncPred as having functional effect

Region	SNP ID	Chr. position	MAF	TFBS	miRNA
3′ UTR	rs2506	52765749	0.3389	–	✓
3′ UTR	rs2083771	52765918	0.3391	–	✓
3′ UTR	rs2099902	52766089	0.3387	–	✓
3′ UTR	rs2099903	52766097	0.2732	–	✓
3′ UTR	rs2165813	52766224	0.2742	–	✓
3′ UTR	rs2120131	52766258	0.2742	–	✓
3′ UTR	rs2120132	52766280	0.2734	–	✓
3′ UTR	rs10824792	52766446	0.4519	–	✓
3′ UTR	rs10082466	52766862	0.2770	–	✓
Intron	rs1982266	52770876	0.4774	✓	–
Intron	rs17334270	52771083	0.2835	✓	–
Intron	rs13312736	52771221	0.2835	✓	–
5′ near gene	rs7095891	52771701	0.2833	✓	–
5′ near gene	rs11003123	52771774	0.2837	✓	–
5′ near gene	rs7096206	52771925	0.1955	✓	–
5′ near gene	rs36014597	52772040	0.2837	✓	–
5′ near gene	rs7084554	52772053	0.2831	✓	–
5′ near gene	rs11003124	52772131	0.2835	✓	–
5′ near gene	rs11003125	52772254	0.3061	✓	–
5′ near gene	rs920724	52773037	0.2953	✓	–
5′ near gene	rs7916582	52773235	0.2841	✓	–
5′ near gene	rs10824794	52773429	0.2841	✓	–
5′ near gene	rs10824795	52773533	0.2841	✓	–
5′ near gene	rs1031101	52773600	0.1222	✓	–

MAF minor allele frequency, TFBS transcription factor binding site, ✓ SNPs which affect function, – SNPs which does not affect function