Table 1 Known haloacid-dehalogenating bacteria and their dehalogenases
From: l-2-Haloacid dehalogenase (DehL) from Rhizobium sp. RC1
Organism | Substrate for growth | Dehalogenase | Substrate for enzyme | References |
|---|---|---|---|---|
P. putida PP3 | d,l-2-Chloropropionate, 2,2-dichloropropionate | DehI/DehII | Monochloroacetate, dichloroacetate, d,l-2-chloropropionate, 2,2-dichloropropionate | Senior et al. (1976), Weightman et al. (1979), Slater et al. (1979) and Weightman et al. (1982) |
Rhizobium sp. RC1 | d,l-2-Chloropropionate, 2,2-dichloropropionate | DehD | Monochloroacetate, monobromoacetate, d-2-chloropropionate | Berry et al. (1979), Leigh et al. (1986), Cairns et al. (1996) and Stringfellow et al. (1997) |
DehE | Monochloroacetate, monobromoacetate, dichloroacetate, dibromoacetate, trichloroacetate, tribromoacetate, d,l-2-chloropropionate, 2,2-dichloropropionate | |||
DehL | l-2-Chloropropionate, dichloroacetate, dibromoacetate | |||
Moraxella sp. B | Fluoroacetate | H-I | Fluoroacetate | |
H-II | Monochloroacetate, monobromoacetate, monoiodoacetate, dichloroacetate, d,l-2-chloropropionate | |||
Pseudomonas putida 109 | d,l-2-Chloropropionate | Deh 109 | Monochloroacetate, monobromoacetate, monoiodoacetate, l-2-chloropropionate, 2,2-dichloropropionate, d,l-2-bromopropionate d,l-bromobutyrate | Motosugi et al. (1982a) |
Pseudomonas sp. 113 | d,l-2-Chloropropionate | Haloalkanoic acid dehalogenase | Monochloroacetate, monobromoacetate, monoiodoacetate, d,l-2-chloropropionate, d,l-2-bromopropionate 2,2-dichloropropionate, d,l-2-bromo-n-butyrate | Motosugi et al. (1982b) |
Pseudomonas sp. CBS3 | 2-Chloroacetate, 4-chlorobenzoate | DehCI | Monochloroacetate, monobromoacetate, l-2-chloropropionate, dichloroacetate, 2,2-dichloropropionate, | Klages et al. (1983), Schneider et al. (1991) and Mörsberger et al. (1991) |
DehCII | Monochloroacetate, Monobromoacetate, l-2-chloropropionate | |||
Xanthobacter autotrophicus GJ10 | Dichloroacetate, dibromoacetate, d,l-2-chloropropionate, 1,2-dichloroethane | DhlA | Chloromethane, chloroethane, bromoethane, 1,2-dichloroethane, 1,2-dibromoethane, 1-chloropropane, 3-chloropropene, 1-bromopropane, 1,3-dichloropropane, 1-chlorobutane, 1-iodopropane | Janssen et al. (1985), Keuning et al. (1985) and Van der Ploeg et al. (1991) |
DhlB | Monochloroacetate, monobromoacetate, l-2-chloropropionate, dichloroacetate dibromoacetate | |||
Burkholderia cepacia MBA4 | Monobromoacetate, monochloroacetate, 2-bromopropionate | DehIVa | Monobromoacetate, monochloroacetate, dichloroacetate, l-2-chloropropionate, l-2-bromopropionate | Tsang et al. (1988) |
Alcaligenes sp. CC1 | 2-Chlorobutyrate, 2-chloropropionate, monochloroacetate, trans, cis-3-chlorocrotonate, 3-Chlorobutyrate | Haloalkanoic acid dehalogenase | Monochloroacetate, 2-chloropropionate, 2,2-dichloropropionate, dichloroacetate | Kohler-Staub and Kohler (1989) |
P. putida strain AJ1 | d,l-2-Chloropropionate | HadD | Monochloroacetate, monobromoacetate, d-2-chloropropionate, 2,2-dichloropropionate, 2-bromobutyrate, 2-chloro-2-butyrate | Smith et al. (1990), Jones et al. (1992) and Barth et al. (1992) |
HadL | Monochloroacetate, Monobromoacetate, l-2-chloropropionate, 2,2-dichloropropionate, 2-bromobutyrate, 2-chlorobutyrate | |||
Alcaligenes xylosoxidans ABIV | 2,2-Dichloropropionate | DhlC | Monochloroacetate, monobromoacetate, 2,2-dichloropropionate, d,l-2-chloropropionate, 2-chlorobutyrate | Brokamp and Schmidt (1991) |
Ancylobacter aquaticus | Chloroacetate, d,l-2-chloropropionate, 2-chloroethanol, 1,2-dichloroethane | DhlA | 1-Chlopropropane, 1-chlorobutane, 1,2-dichloroethane, 1,2-dibromopropane, 1,3-dichloropropane, 1,4-dichlorobutane | Van den Wijngaard et al. (1992) |
Pseudomonas fluorescens 1 | Fluoroacetate | Haloalkanoic acid dehalogenase | Not determined | Wong et al. (1992) |
Pseudomonas acidovoran | ||||
Pseudomonas sp. YL | d,l-2-Chloropropionate | d,l-DEX | Monochloroacetate, monobromoacetate, monoiodoacetate, d,l-2-chloropropionate, d,l-2-chloro-n-butyrate | Liu et al. (1994) |
l-DEX | Monochloroacetate, monobromoacetate, monoiodoacetate, l-2-chloropropionate, 2,2-dichloropropionate, d,l-2-chloro-n-butyrate | |||
Burkholderia sp. FA1 | Fluoroacetate | FAc-DEX FA1 | Monofluoroacetate, monochloroacetate, monobromoacetate | Kurihara et al. (2003) |
Bradyrhizobium sp. | 2,2-Dichloropropionate | Haloalkanoic acid dehalogenase | Not determined | Marchesi and Weightman (2003) |
Rhodococcus sp. | 3-Chloropropionate | Haloalkanoic acid dehalogenase | 3-Chlorolactate, 3-chloropropionate, 3-chlorobutyrate, 2,3-dichloropropionate, 2,2,3-trichlorobutyrate | Jing and Huyop (2007a) |
3-Chlorobutyrate | ||||
Methylobacterium sp. HN2006B | 2,2-Dichloropropionate | Haloalkanoic acid dehalogenase | Not determined | Jing and Huyop (2007b) |
Pseudomonas sp. R1 | Monochloroacetate | Haloalkanoic acid dehalogenase | Not determined | Ismail et al. (2008) |
Methylobacterium sp. HJ1 | 2,2-Dichloropropionate | Haloalkanoic acid dehalogenase | Dichloroacetate, 2-chloropropionate, 2,2-dichloropropionate, 2,2-dichlobutyrate | Jing and Huyop (2008) |
Pseudomonas sp. B6P | 3-Chloropropionate | Haloalkanoic acid dehalogenase | 3-Chloropropionate, 2,3-dichloropropionate | Mesri et al. (2009) |
P. putida S3 | d,l-2-Chloropropionate | DehD/DehL | Monobromoacetate, monoiodoacetate, monochloroacetate, d-2-chloropropionate, l-2-chloropropionate | Thasif et al. (2009) |
Bacillus sp. TW1 | Monochloroacetate | Haloalkanoic acid dehalogenase | Not determined | Zulkifly et al. (2010) |
Aminobacter sp. SA1 | 2,2-Dichloropropionate, d,l-2-chloropropionate | Haloalkanoic acid dehalogenase | Not determined | Amini et al. (2011) |
Bacillus megaterium GS1 | 2,2-Dichloropropionate | Haloalkanoic acid dehalogenase | Not determined | Roslan et al. (2011) |
Labrys sp. Wy1 | 2,2-Dichloropropionate | Haloalkanoic acid dehalogenase | Not determined | Wong and Huyop (2011) |
Serratia marcescens sp. SE1 | 2,2-Dichloropropionate | Haloalkanoic acid dehalogenase | Not determined | Abel et al. (2012a) |
Ralstonia solancearum strain 121002, Acinobacter baumannii strain 121007, Chromobacterium violaceum strain 121009 | 2,2-Dichloropropionate | Haloalkanoic acid dehalogenase | 2,2-Dichloropropionate, d,l-2-chloropropionate | Abel et al. (2012b) |
Ancylobacter dichloromethanicus | Fluoroacetate | Haloalkanoic acid dehalogenase | Not determined | Camboim et al. (2012a) |
Pigmentiphaga kullae | ||||
Paenibacillus sp. | Fluoroacetate | Haloalkanoic acid dehalogenase | Not determined | Camboim et al. (2012b) |
Cupriavidus sp. | ||||
Ancylobacter sp. | ||||
Ralstonia sp. | ||||
Stenotrophomonas sp. | ||||
Staphylococcus sp. | ||||
Burkholderia sp. DW | 2,2-Dichloropropionate | Haloalkanoic acid dehalogenase | Not determined | Wong and Huyop (2012) |
Enterobacter cloacea D9 | ||||
Arthrobacter sp. S1 | 2,2-Dichloropropionate, d,l-2-chloropropionate, 3-chloropropionate | Haloalkanoic acid dehalogenase | Not determined | Bagherbaigi et al. (2013) |
Arthrobacter sp. strain D2 | Monobromoacetate, 2,2-dichloropropionate, d,l-2-chloropropionate | Haloalkanoic acid dehalogenase | Not determined | Alomar et al. (2014) |
Arthrobacter sp. strain D3 | Monochloroacetate | Haloalkanoic acid dehalogenase | Not determined | Alomar et al. (2014) |
Labrys sp. strain D1 | ||||
Bacillus sp. strain EK1 | 2,2-Dichloropropionate, 2,3-dichloropropionate, d,l-2-chloropropionate | Haloalkanoic acid dehalogenase | Not determined | Khosrowabadi and Huyop (2014) |
Rhodococcus sp. strain EK2 | ||||
Lysinibacillus sp. EK3 | ||||
Microbacterium sp. strain EK4 | ||||
Aminobacter sp. strain EK5 | ||||
Raoutella ornithilolytica | 2,2-Dichloropropionate | Haloalkanoic acid dehalogenase | Not determined | Niknam et al. (2014) |