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Table 1 Primers used in this study

From: Characterization and expression analysis of Toll-interacting protein in common carp, Cyprinus carpio L., responding to bacterial and viral challenge

Primer

Sequence (5′–3′)

Application

Annealing temperature (°C)

ToF

CTTGGGTATGCCGTCTAT

Amplification of Tollip cDNA

59

ToR

GTGCGAATCACCTCCTTA

Amplification of Tollip cDNA

59

GSP3′-1

CAGCCTGTGGTCCTGATG

3′RACE specific out primer

55

GSP3′-2

CCTGCTGTTACATCACAGA

3′RACE specific inner primer

55

GSP5′-1

GGTTCCCTCTCGCAGGCTCTCT

5′RACE specific out primer

55

GSP5′-2

ACGCCCTCTCATCGAAGATTTC

5′RACE specific inner primer

55

U3′-1

TACCGTCGTTCCACTAGTGATTT

3′RACE universal out primer

55

U3′-2

CGCGGATCCTCCACTAGTGATTTCACTATAGG

3′RACE universal inner primer

55

U5′-1

CATGGCTACATGCTGACAGCCTA

5′RACE universal out primer

55

U5′-2

CGCGGATCCACAGCCTACTGATGATCAGTCGATG

5′RACE universal inner primer

55

S11F

CCGTGGGTGACATCGTTACA

Real-time PCR for S11

60

S11R

TCAGGACATTGAACCTCACTGTCT

Real-time PCR for S11

60

RT-TF

CCGTCTCAGCATCACCGTCGTA

Real-time PCR for Tollip

60

RT-TR

TCGCTCCGTTGTGGGCAGTAG

Real-time PCR for Tollip

60

IL-1βF

GCTCGGCTTCATCTTGGAGAATGT

Real-time PCR for IL-1β

60

IL-1βR

GCAAGGTGAGGCTGGTCTTATTGT

Real-time PCR for IL-1β

60

IL-6F

TGAAGACAGTGATGGAGCAGCAGA

Real-time PCR for IL-6

60

IL-6R

CCTCACAGCAATGTGGCGAACA

Real-time PCR for IL-6

60