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Table 3 Contingency table for analysis of linkage disequilibrium between ApaI, BsmI and TaqI polymorphisms

From: Association of vitamin D receptor variants with clinical parameters in prostate cancer

TaqI versus BsmIa

AA

AG

GG

TT

1 (0.29)

19 (5.56)

124 (36.26)

TC

11 (3.22)

137 (40.06)

12 (3.51)

CC

35 (10.23)

2 (0.58)

1 (0.29)

ApaI versus TaqIb

TT

TC

CC

TT

21 (6.14)

60 (17.54)

37 (10.82)

GT

65 (19.01)

99 (28.95)

0

GG

58 (16.96)

1 (0.29)

1 (0.29)

BsmI versus ApaIc

TT

GT

GG

AA

46 (13.45)

1 (0.29)

0

AG

55 (16.08)

102 (29.82)

1 (0.29)

GG

17 (4.97)

61 (17.84)

59 (17.25)

  1. a TaqI versus BsmI: χ2 = 426.57, P < 0.0001*
  2. b ApaI versus TaqI: χ2 = 158.77, P < 0.0001*
  3. c BsmI versus ApaI: χ2 = 188.96, P < 0.0001*
  4. * Significant data