Table 1 Comparison of the partial VP1 sequences of EV types detected in Kenya with those of homotypic prototypes
From: Genotyping of enteroviruses isolated in Kenya from pediatric patients using partial VP1 region
EV type (n) | Sequence identities to homotypic EV prototype strains | |
|---|---|---|
% Nucleotide | % Amino acid | |
CV-A4 (1) | 85.39 | 100 |
CV-A8 (1) | 88.52 | 98.02 |
CV-A10 (1) | 75.03 | 92.16 |
EV-D71 (1) | 97.75 | 99.03 |
CV-A9 (1) | 90.32 | 96.43 |
EV-D75 (2) | 85.71–87.1 | 96.09–98.32 |
CV-B1 (9) | 77.03–80.92 | 95.12 |
CV-B2 (10) | 81.36–83.18 | 96.47–97.65 |
CV-B3 (4) | 75.2–77.56 | 90.12–92.59 |
CV-B4 (6) | 78.34–82.95 | 92.86–100 |
CV-B5 (1) | 85.51 | 93.98 |
CV-B6 (1) | 75.35 | 93.98 |
E-3 (1) | 75.45 | 90.48 |
E-6 (1) | 80.65 | 95.24 |
E-11 (1) | 74.02 | 89.29 |
E-14 (1) | 79.55 | 92.94 |
E-19 (1) | 79.82 | 98.31 |
E-20 (2) | 80.65–82.49 | 94.05–95.24 |
E-21 (1) | 90.91 | 96.47 |
E-25 (1) | 81.57 | 95.24 |
E-30 (1) | 79.09 | 91.76 |
EV-D68 (13) | 85.94–87.5 | 84.89–90.48 |