Gene/ORF | % GC content | 5′ end position | 3′ end position | No. of aa. | Known protein with the highest homology (microorganism) | % amino acid identity (length) | GenBank accession no. |
---|---|---|---|---|---|---|---|
repB | 39 | 297 | 1076 | 259 | Plasmid replication protein, RepB | 100 (259) | YP_003329273.1 |
Plasmid pCD01p07 (L. paracasei subsp. paracasei) | |||||||
ORF2 | 42 | 1461 | 1772 | 103 | Hypothetical protein of plasmid pCD01p08 (L. paracasei subsp. paracasei) | 97 (100) | YP_003329274.1 |
ORF3a | 41 | 1609 | 2148 | 179 | Putative replication protein of plasmid pCD01 (L. paracasei subsp. paracasei) | 100 (179) | YP_003329275.1 |
ORF4a | 36 | 2316 | 2684 | 122 | Hypothetical protein LSEI_A19 of plasmid1 (L. casei ATCC334) | 100 (122) | YP_796451.1 |
ORF5a | 39 | 2977 | 3627 | 216 | Hypothetical protein of plasmid1 (L. casei) | 100 (216) | YP_005351865 |
ORF6a | 38 | 3696 | 4886 | 396 | C-terminus part of type IC specificity subunit protein (L. rhamnosus) | 92 (180) | ZP_04439481.1 |
ORF7 | 43 | 6027 | 6377 | 116 | Plasmid replication protein of pLR001 (L. rhamnosus HN001) | 99 (115) | YP_002221586.1 |
ORF8a | 45 | 6701 | 7237 | 178 | Transposase (L. paracasei subsp. paracasei 8700:2) | 96 (165) | ZP_04672204.1 |
ORF9a | 45 | 7168 | 7488 | 106 | Transposase tnp4 (L. casei BL23) | 100 (106) | YP_002221607.1 |
Transposase (L. rhamnosus HN001) | 100 (106) | YP_002221607.1 | |||||
Transposase (L. buchneri ATCC 11577) | 100 (106) | ZP_03943910.1 |