Microbial community profiles of the colon from steers differing in feed efficiency

Myer, Phillip R; Wells, James E; Smith, Timothy P L; Kuehn, Larry A; Freetly, Harvey C

doi:10.1186/s40064-015-1201-6

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Table 5 Relative abundance of significant OTUs within ADG and ADFI phenotypes

From: Microbial community profiles of the colon from steers differing in feed efficiency

OTU ID	Classification	Phenotype^a				Effect	SEM	P value^b
OTU ID	Classification	ADG_High	ADG_Low	ADFI_High	ADFI_Low	Effect	SEM	P value^b
denovo26989	Bacteroides	0.0094	0.0027	0.0101	0.0020	Intake	0.0025	0.0491
denovo77346	Blautia	0.0015	0.0011	0.0021	0.0005	Intake	0.0004	0.0497
denovo8562	Butyrivibrio	0.0012	0.0019	0.0016	0.0015	Gain*Intake	0.0003	0.0156
denovo8936	Coprococcus	0.0040	0.0011	0.0036	0.0014	Gain*Intake	0.0007	0.0499
denovo28680	Family Clostridiaceae	0.0048	0.0017	0.0053	0.0013	Intake	0.0012	0.0486
denovo43262	Family Lachnospiraceae	0.0046	0.0017	0.0047	0.0016	Gain*Intake	0.0013	0.0494
denovo6452	Family Lachnospiraceae	0.8348	0.1100	0.7984	0.1464	Gain*Intake	0.2365	0.0496
denovo13622	Family Peptostreptococcaceae	0.0010	0.0012	0.0006	0.0016	Intake	0.0003	0.0492
denovo50904	Family Ruminococcaceae	0.0038	0.0019	0.0009	0.0048	Intake	0.0005	0.0034
denovo53814	Family Ruminococcaceae	0.0028	0.0010	0.0026	0.0012	Intake	0.0004	0.0486
denovo6911	Family Ruminococcaceae	0.0036	0.0016	0.0039	0.0013	Gain*Intake	0.0007	0.0492
denovo69598	Family Ruminococcaceae	0.0029	0.0014	0.0010	0.0033	Gain*Intake	0.0006	0.0495
denovo25283	Family Ruminococcaceae	0.0411	0.0304	0.0258	0.0458	Intake	0.0057	0.0497
denovo359	Family Ruminococcaceae	0.0196	0.0112	0.0234	0.0073	Intake	0.0047	0.0499
denovo8377	Order Bacteroidales	0.0024	0.0012	0.0027	0.0009	Gain*Intake	0.0006	0.0494
denovo40361	Order Clostridiales	0.0031	0.0018	0.0034	0.0015	Gain*Intake	0.0007	0.0491
denovo43715	Order Clostridiales	0.0118	0.0095	0.0148	0.0066	Intake	0.0023	0.0492
denovo51765	Oscillospira	0.0035	0.0088	0.0033	0.0090	Gain	0.0016	0.0484
denovo26903	Prevotella	0.0034	0.0103	0.0114	0.0022	Gain	0.0022	0.0494
denovo23534	Prevotella copri	0.0121	0.0042	0.0131	0.0031	Gain*Intake	0.0036	0.0491

^aData is shown as LSMeans.
^b P values indicate groups that differ (P < 0.05).

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