|
Sequencing method
|
Total bases (Mbp)
|
Total reads
|
Duplicate (%)
|
Reads useda
|
Mean read length (bp)
|
Longest read (bp)
|
Theoretical coverageb
|
|---|
|
GS FLX+ (R1)
|
307.39
|
556,192
|
9.01
|
506,091
|
552.67
|
1,180
|
86.3
|
|
GS FLX+ (R2)
|
233.31
|
526,372
|
9.96
|
473,924
|
443.24
|
1,340
|
65.5
|
|
GS FLX+ (Total)
|
540.70
|
1,082,564
|
9.47
|
980,015
|
499.46
|
1,340
|
151.8
|
|
Ion Torrent (IT)
|
40.67
|
359,877
|
0.09
|
359,558
|
113.01
|
222
|
11.4
|
|
Overall
|
581.37
|
1,442,441
|
7.13
|
1,339,573
|
403.05
|
1,340
|
163.3
|
-
aAfter removal of duplicates.
-
bBased on draft genome size of 3.56 Mbp.
