Table 2 Splice variants of pax7 paralogs
From: Oncorhynchus mykiss pax7 sequence variations with comparative analyses against other teleost species
cDNA variants | 13 aa (±)ǂ | 5/4 aa (±)ǂ | 4 aa (±)ǂ | SNP | CDs (bp)* | Protein (aa) | Accession number |
|---|---|---|---|---|---|---|---|
rtpax7α | GQYAGPEYVYCGT | GEASS | GNRT | K/R | |||
1 | + | + | − | K | 1,548 | 515 | JQ303311 |
2 | + | − | + | K | 1,545 | 514 | JQ303312 |
3 | − | + | + | K | 1,521 | 506 | JQ303313 |
4 | − | + | − | K | 1,509 | 502 | JQ303314 |
rtpax7β | GQYTGPEYVYCGT | GEAS- | GNRT | K/R | CDs (bp)* | Protein (aa) | Accession number |
|---|---|---|---|---|---|---|---|
1 | + | + | + | R/K | 1,557 | 518 | JQ303315 |
2 | + | + | − | R | 1,545 | 514 | JQ303316 |
3 | + | − | + | R/K | 1,545 | 514 | JQ303317 |
4 | − | + | + | R/K | 1,518 | 505 | JQ303318 |
5 | − | + | − | R | 1,506 | 501 | JQ303319 |
6 | − | − | − | R | 1,494 | 497 | JQ303320 |
7 | − | − | + | K | 1,506 | 501 | JQ303321 |