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Table 1 ATM gene variants detected in controls and breast cancer patients

From: ATM gene mutations in sporadic breast cancer patients from Brazil

Position Exon/Intron

Nucleotide change

Residue

Variation type

Functional impact*

7

c.378 T > A

p.D126E

Non-Synonymous

Neutral

7

c.1287-18delT

N/A

Non-coding

-

9

c.735C > T

p.V245V

Synonymous

Neutral

13

c.1744 T > C

p.F582L

Non-Synonymous

Neutral

15

c.2119 T > C

p.S707P

Non-Synonymous

Neutral

16

c.2193C > T

p.Y731Y

Synonymous

Neutral

18

c.2442C > A

p.D814E

Non-Synonymous

Neutral

19

c.2572 T > C

p.F858L

Non-Synonymous

Damaging

20

c.2685A > G

p.L895L

Synonymous

Neutral

20

c.2805G > C

p.T935T

Synonymous

Neutral

23

c.3118A > G

p.M1040V

Non-Synonymous

Neutral

24

c.3161C > G

p.P1054R

Non-Synonymous

Damaging

32

c.4578C > T

p.P1526P

Synonymous

Neutral

39

c.5557G > A

p.D1853N

Non-Synonymous

Neutral

55

c.8536 + 13insT

N/A

Non-coding

-

56

c.8653 + 30insT

N/A

Non-coding

-

62

c.9372 + 8A > C

N/A

Non-coding

-

  1. http://genetics.bwh.harvard.edu/pph2/; http://provean.jcvi.org/genome_submit_2.php;
  2. http://chromium.liacs.nl/LOVD2/home.php?select_db=ATM (Last update January 2012); http://www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi?geneId=472; http://www.ensembl.org/Homo_sapiens/Gene/Variation_Gene/Table?db=core;g=ENSG00000149311;r=11:108093211–108239829; * http://www.1000genomes.org/1000-genomes-browsers; http://evs.gs.washington.edu/EVS/.