Sequence exploration reveals information bias among molecular markers used in phylogenetic reconstruction for Colletotrichum species

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Table 3 Tests of homogeneity of base substitution patterns

Marker	Number of positions in final data set	Number of isolates¹	Isolate ID
ACT	158	3	PAW-Cg-118, PAW-Cg-107 and PAW-Cg-108
GAPDH	164	0	…
ITS	481	0	…
TUB2	287	11	PAW-Cg-9, PAW-Cg-111, PAW-Cg-112, PAW-Cg-114, PAW-Cg-116, PAW-Cg-119, PAW-Cg-121, PAW-Cg-8, PAW-Cg-9 and PAW-Cg-41

¹A Monte Carlo test (1000 replicates) was used to estimate the P-values (P ≤0.05); the number and identity of isolates with a P-value smaller than 0.05. All positions containing gaps and missing data were eliminated from the data set (complete deletion option).