Table 1 Description of target and reference genes amplified in Quercus suber
Target genes (TDF code) | Homology | Accession number | Amplicon length (bp) |
|---|---|---|---|
1,3-beta glucanase (QsGlu) (clone 27–2) | Ricinus communis glucan endo-1,3-β-glucosidase (XM_002518884.1) | KF704744 | 1230 |
Alcohol dehydrogenase (QsADH) (clone 29–1) | Dimocarpus longan alcohol dehydrogenase (DQ515803.1) | KF704745 | 1146 |
Thaumatin-like protein (QsTLP) (clone 59–1) | Cucumis sativus thaumatin-like protein [(LOC101227447), (XM_004163769.1)] | KF704742 | 750 |
Chitinase (QsCHI) (clone 60–1) | Fragaria vesca subsp. vesca chitinase-like protein 2-like (XM_004295058.1) | KF704743 | 951 |
Reference genes | Â | Â | Â |
RNA polymerase II (QsRPII) | - | KJ563261 | 954 |
β-tubulin (QsTUB) | - | KJ563262 | 1341 |
Eukaryotic translation initiation factor 5A (QsEIF-5A) | - | KJ563263 | 811 |
Clathrin adaptor complexes medium subunit family protein (QsCACs) | - | ID6728500 | 175 |