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Table 4 Identified of novel miRNAs from upland cotton

From: Identification of novel microRNAs in the Verticillium wilt-resistant upland cotton variety KV-1 by high-throughput sequencing

miRNA_id

Mature miRNA sequence(5′→3′)

LM(nt)

MFEIs

ghr-miR8156-5p

AAACUAUUCCUGGCUGAUUCG

21

1.00

ghr-miR7513-3p

AAUCAGCCAGGAAUCGUUUGA

21

0.97

ghr-miR8157-5p

AAGGCAAAGGAAGAAAAAGAGUG

23

1.08

ghr-miR8158-3p

AAGGGAGAACCUAGAUUCAUU

21

1.21

ghr-miR8159-5p

AAUGGAGGAGUUGGAAAGAUU

21

1.23

ghr-miR8160-5p

ACAGCUUUAGAAAUCAUCCCU

21

1.64

ghr-miR8161-3p

GUGGAUUAAAAUUUUGGUUGG

21

1.05

ghr-miR8162-5p

ACUUGCCUGCAUCUUUCAAAGA

22

0.87

ghr-miR8163-3p

GGUUGCUUACUUCUCUUCUGU

21

1.10

ghr-miR8164-3p

CCUAAUAAGGAUGAUGUCUCA

21

1.03

ghr-miR8165-3p

UCCAUAUUUCACUAUCUCUUA

21

1.31

ghr-miR8166-3p

CACAGGGACAAUACCUUCUAC

21

1.04

ghr-miR8167-5p

AGCUUUAGAAAUCAUCCCUU

20

1.54

ghr-miR7495a-3p

UUACUUUAGAUGUCUCCUUCA

21

0.87

ghr-miR8168-5p

AUUCAAACACAACACAGUGCA

21

0.97

ghr-miR7508-5p

CAAGAAAAGAAGUCGGGAGAG

21

0.94

ghr-miR8169-5p

CGGACUCUCAAACAGUGGAGGUA

23

0.90

ghr-miR8170-3p

CAAAUGAGUUAGGCGAGAGGU

21

1.12

ghr-miR8171-3p

UCGGGGCUUUAGCGGCGUUUUUA

23

1.12

ghr-miR8172-5p

GACGGGUGAUGGAAGUUUUUGG

22

0.96

ghr-miR8173-5p

GGAAUGGAGGAGUUGGAAAGA

21

1.40

ghr-miR8174-3p

ACAGCUUUAGAAAUCAUCCCU

21

1.00

ghr-miR8175-3p

AUGAGCUAGAAGUUGGAACUC

21

1.21

ghr-miR8176-5p

UAAGUGAAGAAAGAGGUAGGUU

22

1.16

ghr-miR8177-5p

UCAUGGUCUUUAGCGGUGUUU

21

1.34

ghr-miR8178-3p

AUGAGCUAGAAGUUGGAACUC

21

1.24

ghr-miR8179-5p

UCGGACUGGAUUUGUUGACAA

21

0.91

ghr-miR8180-5p

UGAACUUGGUAACUAUUCCCAC

22

1.16

ghr-miR8181-5p

UGAGUGGAGUUAGGAGACAAA

21

0.92

ghr-miR8182-3p

UCGCUUCCCUAAUUUGGACGA

21

0.86

ghr-miR8183-3p

GCAUCAGAGGACUCAGGCAGGU

22

1.07

ghr-miR8184-5p

UGGCACGGCUCAAUCAAAUUA

21

0.98

ghr-miR8185-5p

UUAGAAGUUAGAUUGCAUUUUG

22

1.43

ghr-miR8186-3p

UCUAACGUGUAGGGACUAAUU

21

1.22

ghr-miR8187-5p

UUAUGAUCUUUAGCGGCGUUU

21

1.38

ghr-miR8188-5p

UUGCAUGACACUACUUUAAAU

21

1.06

ghr-miR8189-3p

GUGUUUCGCGCGUGGACGACG

21

1.26