Primer | Gene | Nucleotide sequence | Amplicon size | Melting point |
---|---|---|---|---|
bp | °C | |||
Control | ||||
mGAPDH | Glyceraldehyde-3-phosphate dehydrogenase | 5′- AGG TCG GTG TGA ACG GAT TTG -3′ | 95 | 62.6 |
5′- GGG GTC GTT GAT GGC AAC A -3′ | 62.6 | |||
Hepatic markers | ||||
m1AAT | Alpha-1-antitrypsin | 5′- CTC GTC CGC TCA CTA AAC AAG -3′ | 248 | 60.7 |
5′- GCT GTC TGA GAG TCA AGG TCT T -3′ | 61.3 | |||
mAFP | Alpha-fetoprotein | 5′- CCA TCA CCT TTA CCC AGT TTG T -3′ | 101 | 60.2 |
5′- CCC ATC GCC AGA GTT TTT CTT -3′ | 60.6 | |||
mALB | Albumin | 5′- TGC TTT TTC CAG GGG TGT GTT -3′ | 167 | 62.4 |
5′- TTA CTT CCT GCA CTA ATT TGG CA -3′ | 60.2 | |||
mCYP7A1 | Cytochrome P450, family 7, subfamily a, polypeptide 1 | 5′- AAC GGG TTG ATT CCA TAC CTG G -3′ | 126 | 62.0 |
5′- GTG GAC ATA TTT CCC CAT CAG TT -3′ | 60.0 | |||
mG6P | Glucose-6-phosphatase | 5′- CGA CTC GCT ATC TCC AAG TGA -3′ | 208 | 61.0 |
5′- GGG CGT TGT CCA AAC AGA AT -3′ | 60.9 | |||
mPEPCK | Phosphoenolpyruvate carboxykinase 1 | 5′- TGA CAG ACT CGC CCT ATG TG -3′ | 153 | 61.0 |
5′- CCC AGT TGT TGA CCA AAG GC -3′ | 61.4 | |||
mTAT | Tyrosine aminotransferase | 5′- AGC CGA ATC CGA ACA AAA CC -3′ | 146 | 60.9 |
5′- GCC GAT AGA TGG GGC ATA GC -3′ | 61.3 | |||
mTDO | Tryptophan 2,3-dioxygenase | 5′- AAT CCA TGA CGA GCA CCT ATT CA -3′ | 140 | 61.4 |
5′- TCA CCT TGA GCA TGT TCC TCT -3′ | 60.8 | |||
Liver-enriched transcription factors | ||||
mHnf3α | Forkhead box A1 (Foxa1) | 5′- GGA GTT GAA GTC TCC AGC GTC -3′ | 157 | 62.4 |
5′- GGG GTG ATT AAA GGA GTA GTG GG -3′ | 61.7 | |||
mHnf3β | Forkhead box A2 (Foxa2) | 5′- TCC GAC TGG AGC AGC TAC TAC -3′ | 176 | 62.8 |
5′- GCG CCC ACA TAG GAT GAC A -3′ |  | |||
mHhex | Hematopoietically expressed homeobox | 5′- CGA GAC TCA GAA ATA CCT CTC CC -3′ | 162 | 61.2 |
5′- CTG TCC AAC GCA TCC TTT TTG -3′ | 60.0 | |||
mTbx3 | T-box 3 (Tbx3), transcript variant 2 | 5′- TGG AAC CCG AAG AAG ACG TAG -3′ | 84 | 61.2 |
5′- TAC CCC GCT TGT GAA ACT GG -3′ | 62.1 | |||
Pancreas-enriched transcription factors | ||||
mHes1 | Hairy and enhancer of split 1 | 5′- TCA ACA CGA CAC CGG ACA AAC -3′ | 155 | 63.0 |
5′- ATG CCG GGA GCT ATC TTT CTT -3′ | 61.0 | |||
mNgn3 | Neurogenin 3 | 5′- CCA AGA GCG AGT TGG CAC T -3′ | 236 | 62.3 |
5′- CGG GCC ATA GAA GCT GTG G -3′ | 62.5 | |||
mPax4 | Paired box gene 4 | 5′- GCA GTG TGA ATC AGC TAG GGG -3′ | 103 | 62.5 |
5′- CAG GGT CGC ATC CCT CTT ATT -3′ | 61.3 | |||
mPax6 | Paired box gene 6 | 5′- AAC AGT CAC AGC GGA GTG AAT -3′ | 196 | 61.7 |
5′- ACA CAA CCG TTG GAT ACG TTT T -3′ | 60.7 | |||
mPdx1 | Pancreatic and duodenal homeobox 1 | 5′- CCC CAG TTT ACA AGC TCG CT -3′ | 117 | 62.2 |
5′- CTC GGT TCC ATT CGG GAA AGG -3′ | 62.7 | |||
mPtf1a | Pancreas specific transcription factor, 1a | 5′- GCT ACA CGA ATA CTG CTA CCG -3′ | 134 | 60.3 |
5′- CGC AGC AAT AGC TGA CGT TG -3′ | 62.0 |