Table 3 Expression analysis of genes for transcription factors by deep sequencing in first-passage SGC and LPC cultures (data are normalized for the total number of reads)
Gene | Read number per mRNA (x10−6) | SGC/LPC ratio of gene read numbers | |
|---|---|---|---|
SGC | LPC | ||
Gata4 | 0.125 | 15.989 | 0.008 |
Gata6 | 0.125 | 17.597 | 0.007 |
Hnf-1α | 0.062 | 1.244 | 0.05 |
Hnf-1β | 0.031 | 9.132 | 0.003 |
Hnf-3α | 41.832 | 2.457 | 17 |
Hnf-3β | 0.405 | 4.581 | 0.1 |
Hnf-3γ | 0 | 0.061 | 0 |
Hnf-4α | 0.03 | 13.106 | 0.0002 |
Hnf-4β | 0 | 0 | - |
Hnf-4γ | 0.187 | 0.303 | 0.6 |
Sox7 | 0.53 | 5.097 | 0.1 |
Sox9 | 172.626 | 11.165 | 15.5 |
Sox17 | 0 | 1.001 | 0 |
Hhex | 9.351 | 31.886 | 0.3 |
Tbx3 | 5.891 | 1.517 | 4 |
Prox1 | 0.468 | 1.365 | 0.3 |
OC-2 | 0.249 | 16.565 | 0.02 |
Notch | 82.23 | 67.656 | 1.2 |
Jag1 | 135.283 | 93.566 | 1.4 |