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Table 6 List of primers and adapters used in the experiments

From: Effect of ATG initiation codon context motifs on the efficiency of translation of mRNA derived from exogenous genes in the transgenic silkworm, Bombyx mori

Name

Sequences

Primer

 

 EGFP-BstI-U

5′-GGGATCCGCTAGCACCATGGTTTCGAAGGGCGAG-3′

 EGFP-Stop(+)-L

5′-GGAATTCGGACCGCTAGCTTACTTGTACAGCTCG-3′

 pGL3-U

5′-GGATCGATCAAAAACATAAAGAAAGGCCCGGCG-3′

 pGL3-L

5′-GGGCTAGCTTACACGGCGATCTTTCCGCCCTTC-3′

 EGFPLCU2

5′-AACTTCAAGATCCGCCACAACATCGAGGAC-3′

 EGFPLCL2

5′-AGGACCATGTGATCGCGCTTCTCGT-3′

 rp49LCF2

5′-GGATCGCTATGACAAACTTAAGAGGA-3′

 rp49LCR1

5′-TGCTGGGCTCTTTCCACGA-3′

Adapter

 

 NC

5′-GATCCGCTAGCCCGGCGGCGTATGGTTT-3′

 

   3′-GCGATCGGGCCGCCGCATACCAAAGC-5′

 PC

5′-GATCCGCTAGCAAAAATCAAAATGGTTT-3′

 

   3′-GCGATCGTTTTTAGTTTTACCAAAGC-5′

 7N3P

5′-GATCCGCTAGCCCGGCGGAAAATGGTTT-3′

 

   3′-GCGATCGGGCCGCCTTTTACCAAAGC-5′

 7P3N

5′-GATCCGCTAGCAAAAATCCGTATGGTTT-3′

 

   3′-GCGATCGTTTTTAGGCATACCAAAGC-5′

 AAT

5′-GATCCGCTAGCCCGGCGGAATATGGTTT-3′

 

   3′-GCGATCGGGCCGCCTTATACCAAAGC-5′

 AGT

5′-GATCCGCTAGCCCGGCGGAGTATGGTTT-3′

 

   3′-GCGATCGGGCCGCCTCATACCAAAGC-5′

 CAA

5′-GATCCGCTAGCCCGGCGGCAAATGGTTT-3′

 

   3′-GCGATCGGGCCGCCGTTTACCAAAGC-5′

 CGA

5′-GATCCGCTAGCCCGGCGGCGAATGGTTT-3′

 

   3′-GCGATCGGGCCGCCGCTTACCAAAGC-5′

 Ser1

5′-GATCCGCTAGCGACCGCCAACATGGTTT-3′

 

   3′-GCGATCGCTGGCGGTTGTACCAAAGC-5′

 Vert3

5′-GATCCGCTAGCCCGGCGGACCATGGTTT-3′

 

   3′-GCGATCGGGCCGCCTGGTACCAAAGC-5′

 Vert9

5′-GATCCGCTAGCCGCCGCCACCATGGTTT-3′

 

   3′-GCGATCGGCGGCGGTGGTACCAAAGC-5′

 atgA

5′-GATCCGCTAGCCCGGCGGAATATGATTT-3′

 

   3′-GCGATCGGGCCGCCTTATACTAAAGC-5′

 atgC

5′-GATCCGCTAGCCCGGCGGAATATGCTTT-3′

 

   3′-GCGATCGGGCCGCCTTATACGAAAGC-5′

 atgT

5′-GATCCGCTAGCCCGGCGGAATATGTTTT-3′

 

   3′-GCGATCGGGCCGCCTTATACAAAAGC-5′

 IB-BlnI

5′-AGCTTCCTAGGGTCGACGGTAC-3′

 

   3′-AGGATCCCAGCTGC-5′