High levels of genetic diversity in Penaeus monodon populations from the east coast of India

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Table 1 D-loop sequence based diversity analysis

	No. of seq.	NCBI accession numbers	No. of seg. sites S	No. of Haplotype	Haplotype diversity Hd	No. of polymorphic loci	Expected heterogenity	Total no. of alleles	Avg. no. of differences K	Avg. no, of pairwise differences	Nucleotide diversity with JC Pi-JC
Vizag	27	JQ863127-JQ863156	143	14	0.9195	38	0.03345	1.236	11.0022	6.386	0.035086 ± 0.01910
Kakinada	24	JQ863157-JQ863186	251	21	0.9310	129	0.15094	1.934	40.1207	37.215	0.204479 ± 0.102747
Nellore	30	JQ863187-JQ863216	23	8	0.8643	47	0.03468	1.165	4.8392	6.635	0.036457 ± 0.019701
Total	81		417	43	2.7148		0.07546	2.192	90.4458	0.3162	0.4522 ± 0.1415
		Mean	139	14.33	0.9049	71.333			18.8443	17.727	0.1507 ± 0.0471