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Table 2 FDR of each classification proposal - Sim2

From: Identification of differentially expressed genes in microarray data in a principal component space

Method and scenario

Mean FDR

FDR Sd

FDR p_2.5

FDR p_50

FDR p_97.5

DAPC-favorable

0.09688

0.00314

0.09067

0.09687

0.10299

Cd with DAPC-favorable

0.07923

0.00607

0.068

0.0792

0.09132

Cd-favorable

0.00745

0.00049

0.00675

0.0075

0.00807

Cd inter DAPC-favorable

0.00257

0.00875

0

0

0.03226

DAPC-normal

0.14214

0.00352

0.13551

0.14219

0.14941

Cd with DAPC- normal

0.05079

0.00829

0.03592

0.05036

0.06696

Cd- normal

0.0133

0.00062

0.01209

0.01329

0.01456

Cd inter DAPC- normal

0.08163

0.04024

0.03704

0.06667

0.17647

DAPC-unfavorable

0.27408

0.00252

0.26896

0.27408

0.27905

Cd with DAPC-unfavorable

0.07828

0.0043

0.06844

0.07844

0.08929

Cd-unfavorable

0.05736

0.00407

0.05205

0.05484

0.06373

Cd inter DAPC-unfavorable

0.2268

0.11732

0.07143

0.2

0.5

DAPC-bad

0.33817

0.00268

0.33264

0.33829

0.34306

Cd with DAPC-bad

0.12906

0.0063

0.11663

0.12846

0.13967

Cd-bad

0.11304

0.00462

0.10167

0.11418

0.12247

Cd inter DAPC-bad

0.29145

0.14786

0.09091

0.25

0.625