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Table 1 FDR of each classification proposal - Sim1

From: Identification of differentially expressed genes in microarray data in a principal component space

Method and scenario

Mean FDR

FDR Sd

FDR p_2.5

FDR p_50

FDR p_97.5

DAPC-favorable

0.0024

0.00276

0

0.00208

0.00834

Cd with DAPC-favorable

0.02221

0.00983

0.00455

0.02111

0.04227

Cd-favorable

0.00596

0.00138

0.00419

0.00497

0.00802

Cd inter DAPC-favorable

0.0012

0.00631

0

0

0.01638

DAPC-normal

0.01831

0.00061

0.01717

0.01829

0.01949

Cd with DAPC- normal

0.01299

0.00407

0.00757

0.01215

0.02248

Cd- normal

0.12555

0.00496

0.11787

0.12411

0.13476

Cd inter DAPC- normal

0.11197

0.11205

0.03333

0.07692

0.5

DAPC-unfavorable

0.42963

0.00144

0.42684

0.42963

0.43252

Cd with DAPC-unfavorable

0.30382

0.00779

0.28949

0.30329

0.31485

Cd-unfavorable

0.4887

0.00582

0.47921

0.49235

0.49494

Cd inter DAPC-unfavorable

0.35083

0.15161

0.11111

0.33333

0.66667

DAPC-bad

0.54284

0.00176

0.53932

0.54279

0.54624

Cd with DAPC-bad

0.29472

0.00856

0.27756

0.2939

0.31336

Cd-bad

0.62961

0.00395

0.62148

0.63069

0.63475

Cd inter DAPC-bad

0.56905

0.17942

0.2

0.57143

0.85714