|
Ribotype
|
NCBI matches
|
Top 10 of site
|
Relative abundances (rfu)
|
ANOVA
|
|---|
| | | |
Burren
|
Ardgillan
|
Wicklow
| |
|---|
|
225
|
ni
|
W,A,B
|
1480±130 a
|
2704±259 a
|
2265±432 a
|
4.26 ns
|
|
241
|
ni
|
W
|
0±0 c
|
538±83 b
|
1796±212 a
|
49.08***
|
|
282
|
An, αP, γP
|
B
|
2982±272 a
|
488±116 b
|
0±0 b
|
87.99***
|
|
301
|
An, F
|
A
|
872±124 a
|
1444±165 a
|
803±341 a
|
2.34 ns
|
|
302
|
An, F
|
A
|
0±0 b
|
1499±82 a
|
0±0 b
|
333.49***
|
|
324
|
ni
|
B
|
1323±102 a
|
422±38 b
|
0±0 c
|
115.58***
|
|
352
|
ni
|
W
|
0±0 b
|
0±0 b
|
1643±206 a
|
63.84***
|
|
390
|
An, F
|
W
|
0±0 b
|
0±0 b
|
4387±308 a
|
202.24***
|
|
391
|
An, F
|
W
|
0±0 b
|
0±0 b
|
1634±204 a
|
64.24***
|
|
398
|
An, F
|
W
|
0±0 c
|
705±16 b
|
1538±328 a
|
16.49**
|
|
400
|
An
|
A
|
647±48 b
|
3704±106 a
|
1158±237 b
|
115.20***
|
|
409
|
An
|
W
|
0±0 c
|
853±108 b
|
1667±29 a
|
168.33***
|
|
417
|
An
|
B
|
1938±63 a
|
0±0 c
|
214±65 b
|
411.27***
|
|
502
|
γP
|
B
|
1427±35 a
|
0±0 b
|
0±0 b
|
1702.14***
|
|
612
|
ni
|
B
|
4103±85 a
|
0±0 b
|
0±0 b
|
2330.72***
|
|
831
|
F
|
A
|
885±96 b
|
2327±132 a
|
0±0 c
|
154.64***
|
|
835
|
F
|
A
|
1190±83 b
|
2002±175 a
|
0±0 c
|
80.81***
|
|
843
|
F
|
A
|
0±0 b
|
1183±76 a
|
0±0 b
|
244.56***
|
|
846
|
ni
|
A
|
0±0 b
|
3296±153 a
|
0±0 b
|
463.38***
|
|
850
|
F
|
B
|
4376±476 a
|
766±122 b
|
0±0 b
|
67.94***
|
|
853
|
F
|
B
|
3241±212 a
|
0±0 b
|
0±0 b
|
234.04***
|
|
890
|
ni
|
A,B
|
2742±125 a
|
2021±512 a
|
0±0 b
|
21.82**
|
|
895
|
F
|
B
|
1411±121 a
|
0±0 b
|
0±0 b
|
135.38***
|
|
904
|
F
|
A
|
953±13 b
|
1167±95 a
|
0±0 c
|
126.18***
|
|
917
|
ni
|
W
|
509±121 b
|
0±0 c
|
2216±118 a
|
141.19***
|
|
920
|
ni
|
W
|
0±0 b
|
0±0 b
|
9694±612 a
|
250.79***
|
|
953
|
Ad
|
W
|
0±0 b
|
0±0 b
|
1555±258 a
|
36.33***
|
|
Phylotype
| | | | | |
|
Acidobacteria
|
W,A,B
|
0±0 b
|
0±0 b
|
13998±2322 a
|
36.33***
|
|
Actinobacteria
|
W
|
17202±678 a
|
11368±240 b
|
9051±500 c
|
69.05***
|
|
α-Proteobacteria
|
B
|
16234±1365 a
|
0±0 b
|
0±0 b
|
141.36***
|
|
γ-Proteobacteria
|
B
|
17702±1239 a
|
0±0 b
|
0±0 b
|
204.12***
|
|
Firmicutes
|
W,A,B
|
13325±384 b
|
8887±191 c
|
17157±890 a
|
52.66***
|
- Means and variations of the relative abundances in relative fluorescent units (rfu) of individual ribotypes and associated phyla (see Additional file 3: Methods) are presented for each site. Column three indicates the membership in the respective baseline community {Burren (B), Ardgillan (A), Wicklow (W)}. Superscript letters indicate the group differences between relative abundances across sites. The significance of distribution differences between sites are presented in the last column by F-values and their significance level (p = 0.05 ≥ * > 0.01 ≥ ** > 0.001 ≥ ***).
-
Abbreviations: ni – not identified, An – Actinobacteria, Ad – Acidobacteria, F – Firmicutes, αP – α-Proteobacteria, γP – γ-Proteobacteria.
