Skip to main content

Table 8 Correlation analysis between COA axes and codon usage indices

From: Mutational pressure dictates synonymous codon usage in freshwater unicellular α - cyanobacterial descendant Paulinella chromatophora and β - cyanobacterium Synechococcus elongatus PCC6301

Axes

A3

T3

G3

C3

GC3

ENC

CAI

Gravy score

Aromaticity

Length of CDS

Axis 1

0.616**

0.591**

−0.224**

−0.674**

−0.761**

0.588**

0.076**

−0.016

0.018

−0.050*

Axis 2

0.095**

0.086**

0.221**

−0.296**

−0.119**

0.138**

0.068**

0.063*

0.001

0.029

Axis 3

0.107**

0.212**

0.033

−0.025

−0.212**

0.076**

−0.086**

0.096**

0.003

−0.198**

Axis 4

0.053*

0.113**

−0.508**

0.267**

−0.090**

−0.023

0.016

−0.096**

0.065*

−0.137**

Axis 5

0.064*

−0.059*

0.168**

−0.143**

0.003

0.002

−0.036

0.017

0.040

0.044*

  1. Correlation analysis between five different axes of COA and various codon usage indices of 2342 PCG in the cyanobacterial genome of S. elongatus.
  2. Analysis was made using Spearman’s rank correlation method.
  3. *Figures are significant at p ≤ 0.01 (one tailed).
  4. **Figures are significant at p ≤ 0.001 (one tailed).