Table 4 Overall codon usage in S. elongatus
AA | Codon | N (RSCU) | AA | Codon | N (RSCU) |
|---|---|---|---|---|---|
Phe | TTT | 14909(1.11) | Tyr | TAT | 8278(0.87) |
TTC | 11811(0.88) | TAC | 10678(1.12) | ||
Leu | TTA | 6634(0.50) | TER | TAA | 776(0.96) |
TTG | 19535(1.49) | TAG | 922(1.15) | ||
CTT | 7121(0.41) | His | CAT | 6464(0.96) | |
CTC | 20585(1.19) | CAC | 6949(1.03) | ||
CTA | 8678(0.50) | Gln | CAA | 23338(0.98) | |
CTG | 32548(1.88) | CAG | 24092(1.01) | ||
Ile | ATC | 21038(1.50) | Asn | AAT | 10381(0.97) |
ATT | 20131(1.44) | AAC | 10858(1.02) | ||
ATA | 692 (0.05) | Lys | AAA | 10248(1.04) | |
Met | ATG | 11456(1.00) | AAG | 9370(0.95) | |
Val | GTT | 12236(0.94) | Asp | GAT | 25896(1.30) |
GTC | 17788(1.37) | GAC | 13769(0.69) | ||
GTA | 3535(0.27) | Glu | GAA | 24927(1.13) | |
GTG | 18179(1.40) | GAG | 18827(0.86) | ||
Ser | TCT | 4946(0.81) | Cys | TGT | 3451(0.82) |
TCC | 5912(0.97) | TGC | 4905(1.17) | ||
TCA | 4257(0.70) | TER | TGA | 707(0.882) | |
TCG | 9207(1.51) | Trp | TGG | 13533(1.00) | |
Pro | CCT | 7920(0.74) | Arg | CGT | 7985(0.62) |
CCC | 14372(1.35) | CGC | 23748(1.87) | ||
CCA | 7251(0.68) | CGA | 7940(0.62) | ||
CCG | 13017(1.22) | CGG | 11080(0.87) | ||
Thr | ACT | 7789(0.77) | Ser | AGT | 9128(0.82) |
ACC | 15479(1.54) | AGC | 13096(1.17) | ||
ACA | 5513(0.55) | Arg | AGA | 1135(1.17) | |
ACG | 11432(0.77) | AGG | 791(0.82) | ||
Ala | GCT | 19671(0.96) | Gly | GGT | 14414(1.02) |
GCC | 25932(1.27) | GGC | 24840(1.77) | ||
GCA | 14455(0.70) | GGA | 6797(0.48) | ||
GCG | 21572(1.05) | GGG | 9975(0.71) |