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Table 2 Summary of protein, mRNA and FISH results for HER-2 FISH positive tumors that do not over-express HER-2 protein and comparison group of HER-2 FISH positive tumors that do over-express HER-2 protein

From: HER-2 gene amplification in human breast cancer without concurrent HER-2 over-expression

ID number

Western

Western

IHC

FISH

FISH

FISH

RT-PCR

RT-PCR

 

GRB7

HER2

HER2

HER2

BAC 3079

BAC 3014

GRB7

HER2

016

high

low

1 +

2.58

NA

NA

low

low

031

high

low

Cyto Gran Stain

> 3.04

2.80

2.73

high

low

131

high

low

1 +

2.52

1.98

1.94

high

low

412

high

low

1 +

2.78

2.86

2.86

high

low

457

high

low

Cyto Gran Stain

5.21

5.27

5.32

high

low

517

high

low

Cyto Gran Stain

> 3.39

2.78

2.89

low

low

213

high

low

Cyto Gran Stain

4.44

2.48

3.59

high

high

012

high

high

3 +

> 5.13

NA

NA

high

high

020

high

high

3 +

5.28

NA

NA

NA

NA

276

high

high

3 +

4.90

NA

NA

NA

NA

327

high

high

3 +

4.48

3.77

3.77

high

high

334

high

high

3 +

4.93

NA

NA

high

high

369

high

high

3 +

4.98

4.06

4.02

high

high

433

high

high

NA

4.37

4.81

4.54

high

high

772

high

high

NA

4.59

5.18

5.18

high

high

  1. FISH scores represent the ratio of signals derived from HER-2 region specific probes over that derived from the chromosome 17 centromeric region probe (D17Z1). NA = not analyzed.