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Table 1 Results of 16S rDNA sequencing of DGGE-bands of seawater samples in Figure  2

From: Bias problems in culture-independent analysis of environmental bacterial communities: a representative study on hydrocarbonoclastic bacteria

Band no. Total bases Phylum Nearest GenBank match Similarity (%) Bases compared Accession number
1 446 α-Proteobacteria Candidatus Pelagibacter ubique clone fosmid 01-003783 97 466/482 KC147468
2 444 Bacteroidetes Uncultured Bacteroidetes* bacterium clone CB22B12 97 461/477 KC147469
3 455 γ-Proteobacteria Alteromonas macleodii strain CAIM 891 96 494/513 KC147470
4 402 γ-Proteobacteria Alteromonas macleodii strain CAIM 891 93 464/499 KC147471
5 442 γ-Proteobacteria Thalassolituus oleivorans isolate SLHC162b 96 490/513 KC147472
6 450 α-Proteobacteria Phaeobacter caeruleus strain UDC410 98 468/477 KC147473
7 447 α-Proteobacteria Phaeobacter caeruleus strain UDC410 98 465/474 KC147474
8 455 γ-Proteobacteria Alteromonas macleodii strain SWDOH3 97 488/504 KC147475
9 470 γ-Proteobacteria Pseudoalteromonas phenolica 97 504/521 KC147476
10 438 α-Proteobacteria Thalassobius mediterraneus strain D6064 95 466/489 KC147477
11 438 γ-Proteobacteria Alteromonas macleodii strain D7081 94 487/517 KC147478
12 405 γ-Proteobacteria Alteromonas macleodii strain CAIM 891 94 452/481 KC147479
13 430 γ-Proteobacteria Marinobacterium marisflavum strain IMCC4074 94 482/515 KC147480
14 438 γ-Proteobacteria Marinobacterium marisflavum strain IMCC4074 96 485/506 KC147481
15 440 γ-Proteobacteria Uncultured gammaproteobacterium clone OTU29 95 477/501 KC147482
  1. *Hydrocarbon-utilizers (Scherr et al. 2012; Jiménez et al. 2007).