Skip to main content

Table 1 Cultivation type, location and genetic diversity values of traditionally cultivated indigenous and agronomically improved rice varieties including the wild rice ( O. rufipogon ) in Northeast India (AP, Arunachal Pradesh; AS, Assam, ML, Meghalaya, MZ, Mizoram)

From: Genetic structure and diversity of indigenous rice (Oryza sativa) varieties in the Eastern Himalayan region of Northeast India

Variety name Type Location A Na Npo Npe RA I H e
Lahi Sali Doimukh (AP) 11 1.571 3 42.86 1 0.271 0.187
Local Basmati Sali Doimukh (AP) 9 1.286 2 28.57 - 0.148 0.105
Borjahinga Sali N. Lakhimpur, (AS) 10 1.429 2 28.57 - 0.187 0.130
Joha Sali Doimukh (AP) 8 1.143 1 14.29 - 0.096 0.076
Hati Hali Sali N. Lakhimpur, (AS) 13 1.857 5 71.43 1 0.377 0.263
Balam Sali Cachar (AS) 12 1.714 3 42.86 - 0.328 0.222
Lallatoi Sali Hailakandi (AS) 23 3.286 6 85.71 4 0.854 0.498
Arfa Sali Hailakandi (AS) 13 1.857 4 57.14 1 0.438 0.305
Mulahail Sali Hailakandi (AS) 20 2.857 5 71.43 1 0.719 0.435
Guaroi Sali Hailakandi (AS) 13 1.857 5 71.43 - 0.330 0.219
Harinarayan Sali Hailakandi (AS) 11 1.571 3 42.86 - 0.262 0.166
Bherapawa Sali Hailakandi (AS) 8 1.143 1 14.29 - 0.072 0.051
Papue Jum West Siang (AP) 9 1.286 2 28.57 - 0.143 0.105
Sorpuma Jum Doimukh (AP) 10 1.429 3 42.86 - 0.239 0.181
Kawanglawang Jum Aizwal, (MZ) 17 2.429 6 85.71 1 0.578 0.365
Mimutim Jum Garo Hills (ML) 17 2.429 5 71.43 3 0.595 0.384
Til Bora Glutinous N. Lakhimpur, (AS) 12 1.714 5 71.43 - 0.237 0.152
Kakiberoin Glutinous Hailakandi (AS) 12 1.714 4 57.14 - 0.306 0.207
Borua Beroin Glutinous Cachar (AS) 14 2.000 4 57.14 - 0.357 0.224
Ranga Borah Glutinous N. Lakhimpur, (AS) 13 1.857 3 42.86 1 0.239 0.135
Bas Beroin Glutinous Cachar (AS) 10 1.429 3 42.86 - 0.288 0.228
Aubalam Boro Cachar (AS) 15 2.143 5 71.43 1 0.569 0.394
Bashful Boro Cachar (AS) 11 1.571 3 42.86 - 0.315 0.232
Moircha Boro Cachar (AS) 11 1.571 3 42.86 - 0.167 0.098
Ranjit Improved Hailakandi (AS) 7 1 0 0 - 0 0.000
IR8 Improved Hailakandi (AS) 7 1 0 0 - 0 0.000
Bahadur Improved Hailakandi (AS) 7 1 0 0 - 0 0.000
Pankaj Improved Hailakandi (AS) 7 1 0 0 - 0 0.000
Joya Improved Hailakandi (AS) 7 1 0 0 - 0 0.000
O. rufipogon Wild Eastern India 29 4.833 6 85.71 4 1.137 0.556
  1. A = Observed no. of allele; Na = Average no. of alleles per 7 loci; Npo = No. of polymorphic loci; Npe = Percent polymorphic loci; RA = Rare allele; I = Shannon information index; H e = Nei gene diversity.