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Table 3 Pairwise comparisons of nucleotide substitutions and genetic distances of x-HGP sequences of 21 Triticeae species and y-HGP sequences of four Hordeum species

From: Characterization of x-type high-molecular-weight glutenin promoters (x-HGP) from different genomes in Triticeae

 

TACP

AESP

SESY

AEBI

AECO

AELO

AESH

AETA

AESE

AEUM

AEUN

AGCR

THBE

THEL

ERBO

HOBO

HOBR

HOBU

HOSP

HEPE

PSHU

SEST

SECE

TRBO

TRUR

TACP

 

4.70

8.60

5.50

5.10

5.50

5.30

5.10

5.80

5.50

5.00

1.70

7.20

6.40

5.00

15.70

14.60

13.50

14.30

2.10

11.10

8.50

8.30

5.70

5.80

AESP

34/9

 

8.40

2.40

2.10

2.40

2.20

2.30

1.00

3.00

2.50

3.80

6.90

6.10

5.00

14.60

13.40

13.70

14.20

5.00

10.70

8.20

8.10

4.60

4.80

SESY

51/22

53/17

 

8.90

8.50

8.80

8.50

8.50

9.50

8.90

8.50

8.50

5.30

5.00

3.90

15.80

14.90

14.80

15.30

9.10

11.20

0.40

0.50

9.20

9.00

AEBI

34/15

14/5

51/22

 

0.90

1.00

0.80

3.10

3.50

3.90

3.10

4.60

7.50

6.80

5.70

15.20

14.30

14.80

15.30

5.80

11.40

8.80

8.60

5.70

5.90

AECO

31/13

12/5

50/20

4/3

 

0.60

0.40

2.70

3.10

3.50

2.70

4.20

7.10

6.40

5.30

14.70

13.80

14.30

14.80

5.40

10.60

8.30

8.20

5.30

5.50

AELO

34/14

15/4

51/21

5/3

5/0

 

0.30

3.10

3.50

3.90

2.80

4.60

7.10

6.40

5.50

15.20

14.30

14.80

15.30

5.80

11.40

8.60

8.50

5.70

5.90

AESH

32/14

13/4

49/20

3/3

3/0

2/0

 

2.80

3.20

3.60

2.60

4.30

7.10

6.40

5.30

14.90

14.00

14.50

14.90

5.50

11.10

8.30

8.20

5.40

5.70

AETA

34/14

18/3

55/18

18/8

16/7

19/7

17/7

 

3.40

3.20

1.10

3.90

7.20

6.50

5.40

15.00

13.80

14.30

14.80

5.40

10.90

8.50

8.40

5.50

5.50

AESE

40/11

7/2

60/19

20/8

19/6

22/6

14/2

20/5

 

4.10

3.50

4.70

7.80

6.60

6.10

15.70

14.60

15.00

15.50

6.00

11.90

9.40

9.20

5.40

5.70

AEUM

36/17

18/5

54/22

23/10

21/9

24/9

22/9

22/8

28/7

 

3.40

4.30

7.80

6.90

5.80

15.20

13.80

14.30

14.60

5.80

11.70

8.80

8.60

6.00

6.20

AEUN

36/12

21/1

56/18

22/6

19/5

20/5

18/5

6/4

28/3

30/5

 

4.00

7.10

6.20

5.10

14.60

13.40

13.90

14.30

5.30

10.50

8.40

8.20

5.40

5.50

AGCR

13/3

27/8

53/21

29/12

17/11

30/11

28/11

26/10

33/10

30/12

30/8

 

7.10

6.20

4.80

15.30

13.90

13.40

14.00

1.70

10.70

8.40

8.20

5.80

5.90

THBE

43/21

34/15

31/15

39/19

41/19

42/18

43/18

43/19

47/18

46/20

44/17

42/20

 

1.10

2.70

14.90

13.60

13.70

14.10

7.60

10.60

5.10

5.00

7.90

8.00

THEL

37/22

37/15

31/15

37/21

35/19

35/20

34/20

39/19

39/19

39/21

40/17

37/20

7/2

 

2.20

14.70

13.50

13.10

13.50

6.80

10.30

4.90

4.70

7.00

7.20

ERBO

29/15

31/10

26/9

32/15

30/14

32/14

30/14

34/13

39/12

36/15

35/11

30/14

17/7

12/8

 

13.50

12.20

11.40

12.10

5.40

9.20

3.80

3.60

6.10

6.20

HOBO

67/47

67/40

71/47

68/43

66/42

69/42

67/42

68/42

70/43

70/41

69/39

69/45

63/47

63/48

57/44

 

3.90

9.60

10.20

15.80

16.40

16.00

15.50

15.80

16.00

HOBR

64/43

62/35

71/45

63/41

61/40

64/40

67/40

63/39

68/35

64/36

64/35

63/41

59/43

58/44

53/40

23/8

 

8.70

9.00

14.70

15.20

14.70

14.60

15.00

15.00

HOBU

65/33

70/31

76/36

71/34

69/34

74/33

70/34

73/33

76/31

71/32

66/27

68/33

66/37

64/37

56/33

49/29

45/28

 

1.30

13.90

14.30

14.70

14.50

14.50

14.10

HOSP

63/37

68/34

83/45

70/39

67/38

70/38

68/37

70/37

74/36

68/37

71/33

60/32

67/40

61/41

55/37

47/33

40/31

8/4

 

14.60

14.80

15.10

14.90

14.90

14.70

HEPE

16/1

35/10

55/22

36/16

34/14

37/14

35/14

36/13

41/12

39/15

36/11

12/3

46/20

40/21

33/15

69/43

66/42

68/34

37/38

 

11.40

8.90

8.80

6.40

6.50

PSHU

61/33

60/30

63/39

59/34

56/34

61/32

59/34

60/33

67/32

63/35

60/31

59/31

58/37

56/37

51/32

68/53

64/49

71/39

69/43

64/30

 

11.10

10.90

12.40

12.60

SEST

53/21

52/17

3/0

51/22

49/20

51/21

49/21

55/18

59/19

54/21

52/18

53/20

33/15

30/15

24/9

72/47

67/43

75/36

73/39

55/22

62/39

 

0.40

8.80

9.20

SECE

52/22

51/17

4/0

49/23

48/21

50/21

48/21

54/18

58/19

53/22

53/18

51/20

31/11

29/15

24/9

69/28

66/43

74/35

70/40

54/22

60/39

3/0

 

8.60

9.00

TRBO

34/18

29/10

52/25

32/15

30/14

33/14

31/14

35/13

33/13

37/15

37/10

35/17

44/24

38/24

33/17

69/47

67/43

68/37

69/37

39/18

66/26

50/25

49/25

 

1.70

TRUR

32/20

27/12

46/27

31/17

24/16

32/16

30/16

33/15

33/13

36/17

35/13

33/19

42/21

36/24

32/20

68/49

66/44

66/39

64/42

37/20

65/39

49/27

49/32

10/4

 
  1. Note: Percentage of sequence divergence using genetic distance is shown in the upper diagonal. Direct counts of transitions/transversions are shown in the lower diagonal. Species abbreviations are listed in Table 1.
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