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Table 1 Transcription factor binding sites on the promoter region of Thaumatin like proteins (TLPs) and Osmotin like proteins (OLPs)

From: Finding the undiscovered roles of genes: an approach using mutual ranking of coexpressed genes and promoter architecture-case study: dual roles of thaumatin like proteins in biotic and abiotic stresses

Thirteen cis-acting regulatory elements which are shared between all OLPs

Five cis-acting regulatory elements which are shared between all TLPs

Name

Function

Name

Function

ABRE

ABA inducible transcriptional activator

ASRC

Pathogen defense

CAAT

CAAT box

CCAF

Circadian clock associated

CARM

CA-rich element

L1BX

Homeodomain protein

CNAC

Calmodulin binding NAC protein

NCS1

Nodulin consensus sequence

GAGA

(GA)n/(CT)n binding proteins

WBXF

Pathogen defense

IDDF

Intermediate zinc figure protein

  

LEGB

Iron-deficiency-responsive element

  

MIIG

Activator of flavonoid biosynthesis gene

  

NACF

Transcription factor binding to the iron deficiency-responsive element

  

OPAQ

Transcriptional activator

  

PSPE

SA induction of secreted gene

  

SPF1

DNA binding protein that binds to beta amylase

  

WNAC

NAC domain DNA binding factor

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