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Table 2 List of known and novel variants identified by direct sequencing in the MSMB proximal promoter region

From: The rs10993994 in the proximal MSMB promoter region is a functional polymorphism in Asian Indian subjects

Varianta

Promoter positionb

Healthy group genotype counts (n = 50)

BPH genotype counts (n = 30)

PCa genotype counts (n = 32)

P value

HomWTc

Hetd

HomVare

HomWTc

Hetd

HomVare

HomWTc

Hetd

HomVare

rs41274660:T>G

−20

50

00

00

30

00

00

31

01

00

ns

rs10993994:C>T

−57

09

24

17

05

10

15

03

18

11

ns

rs141211965:C>T

−80

49

01

00

30

00

00

32

00

00

ns

rs12770171:C>T

−239

28

19

03

15

13

02

24

06

02

ns

rs10669586:indelCT

−331

49

01

24

06

28

04

ns

KM265191:C>Tf

−176

50

00

00

30

00

00

31

01

00

ns

KM265192:A>Gf

−343

49

01

00

29

01

00

32

00

00

ns

  1. aMajor/Minor allele.
  2. bPosition from start of exon1.
  3. cHomozygous wild type.
  4. dHeterozygous.
  5. eHomozygous variant.
  6. fNovel finding—rare variant.